Pseudomonas ogarae F113: PSF113_3169
Help
Entry
PSF113_3169 CDS
T01734
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00630
Glyoxylate and dicarboxylate metabolism
pfe00680
Methane metabolism
pfe01100
Metabolic pathways
pfe01120
Microbial metabolism in diverse environments
pfe01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSF113_3169
09102 Energy metabolism
00680 Methane metabolism
PSF113_3169
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PSF113_3169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_6
Fer4_15
Fer4_9
Fer4_2
Fer4_18
Fer2
Fer4_16
Fer4_4
Fer4_NDSU1
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
AEV63170
UniProt:
A0ABM6R0L5
LinkDB
All DBs
Position
3733283..3736159
Genome browser
AA seq
958 aa
AA seq
DB search
MITIFDPSSDIDLGTPARESDVQVSLTIDGREISVAFGTSVMRAAALLGTTIPKLCATDS
LEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMVVRTQTSKLATLRRNVMELYISDHPLDC
LTCSANGNCELQTVAGQVGLREVRYGYEGANHLDEAKDVSNPYFEYDPSKCIVCNRCVRA
CEEIQGTFALTITGRGFDSRVAAAGGDNFLDSECVSCGACVQACPTATLIDKSVVEIGQP
ERSVITTCAYCGVGCSFRAEMKGEQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRIT
KPMIRKHIDDPWQEVSWDEAVTYAASELRRIQLKYGRDSIGGITSSRCTNEETYLVQKLV
RTAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQNFDSVMKADVILVMGANPTDAHPVF
GSQLKRRLRQGARLIVIDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALGHVIATEGLI
DQPFVEARCEAADFARWRDFVSLPENSPEVLGPVCGVPAEQIRAAAWLYATGGNAAIYYG
LGVTEHSQGSTSVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISNETVRAQFEQAWNVTLQPDPGLRIPNMFEAALDGTFKALYCQGEDIAQSDPNTQHVTA
ALSALECVIVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMDPLAGKAD
WEATIALADALGYKMHYNHPSEIMDEIARLTPTFTRVSYAELDRHGSLQWPCNDAAPDGT
PTMHIDQFVRGKGRFMLTGYVPTDEKVNGRYPLLLTTGRILSQYNVGAQTRRTDNVAWHE
EDRLEIHPTDAENRGIVDEDWVGIGSRAGQTVLRAKVTERVAPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVEIVRVSQPSEWQKRYQAFSDEQGRLLRERRHAEKAEVRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatcactatcttcgatcccagcagcgatatcgacctgggcaccccggcgcgcgaaagc
gacgtgcaggtcagcctgaccatcgacgggcgcgaaatcagcgtcgccttcggtacctcg
gtcatgcgtgccgcggccttgctcggcaccaccattcccaaactctgcgccaccgacagc
ctggaagccttcggctcctgccgcatgtgcctggtggaaatcgacggcatgcgcggctat
cccgcgtcctgtaccacgccggtaaccgaaggcatggttgttcgcacgcaaacctccaag
ctcgccacgctgcgacgcaacgtgatggagctgtacatttccgaccacccgctggactgc
ctgacatgctcggccaatggcaactgcgaattgcagaccgtggcggggcaggtgggcctg
cgcgaagtacgctacggctacgaaggtgccaatcacctggatgaagccaaggacgtttcc
aacccttatttcgagtacgacccgagcaagtgcatcgtctgcaaccgctgcgtgcgtgcc
tgcgaggaaatccagggcaccttcgccctgacgatcaccggacgcggttttgactctcga
gtggcggcggccggcggtgacaacttcctcgattccgaatgcgtgtcctgcggcgcctgc
gtgcaggcgtgcccgacggcgacgctgatcgacaagagcgtcgtggagatcggccagccg
gagcgcagcgtcatcaccacgtgcgcctactgcggcgtgggttgctcgttccgcgccgag
atgaaaggcgaacaactggtgcgcatggtcccggacaagaacggccaggccaaccacggt
cactcctgcgtcaaggggcgcttcgcctggggctatgccacgcacccggaccgtatcacc
aagccgatgatccgcaagcacatcgatgacccgtggcaggaagtcagttgggatgaggcg
gtcacctacgccgccagcgaattgcgccgcatccagctcaagtacgggcgcgactccatc
ggcggcatcacctccagtcgctgcaccaacgaagaaacctacctggtgcagaaactggtg
cgcaccgcgttcggcaacaacaacgtcgacacttgtgcccgtgtttgccattcgcccacc
ggttatggcctcaagcagaccttgggcgagtccgctggtacccagaacttcgactcggtg
atgaaagccgacgtcatcctggtgatgggcgccaacccgactgacgcgcacccggtgttc
ggctcccagctcaagcgccgcctgcgccagggtgcacggctgatcgtcatcgacccacgg
cgcatcgacctggtggattcgcctcacgcccgtgccgagctgcacttgcaactgcgtccg
ggcaccaacgtggcaatgctcaacgcgttgggccatgtgattgccaccgaaggcttgatt
gaccagccttttgtcgaggcacgctgcgaggcggcggacttcgctcgctggcgcgatttc
gtcagcctgccggaaaactcccctgaggtgctgggcccggtgtgtggcgtgcctgccgag
cagatccgcgccgccgcatggctctacgccaccggcggcaacgcggccatctactacggc
ctcggcgtcaccgagcacagccaaggcagcacctcggtcatgggcatcgccaacctggcc
atggccaccggcaacatcggtcgcgaaggtgtcggggtgaacccgctgcgtggacagaac
aacgtccagggctcctgcgacatgggctcgttcccccacgagctgccgggctatcgacac
atttccaacgaaaccgtacgcgcccagttcgaacaggcctggaacgtcaccctgcaaccc
gacccgggcctgcgtatcccgaacatgttcgaggcggccctggatggcaccttcaaggcg
ctttattgccaaggcgaggacatcgcccagagcgaccccaacacccagcatgtgacggcc
gcgttgtccgctttggagtgcgtgattgtccaggacattttcctcaacgagacggccaag
ttcgcccacgtgttcctgccgggcagctcgttcctggagaaggacggcaccttcaccaac
gccgaacgccgtatctcccgcgttcgcaaggtgatggacccgttggccggcaaggccgac
tgggaggccaccatcgccctggccgacgccctgggctacaagatgcactacaaccatcct
tcggaaatcatggatgaaatcgcccgcctgacgccgactttcacccgcgtcagctacgcc
gaactggatcgtcacggcagcctgcaatggccttgcaacgatgccgcaccggacggtacg
ccgaccatgcacatcgaccagttcgtgcgcggcaaagggcgcttcatgctcaccggctac
gtgcccaccgatgagaaggtcaacggccgctacccgctgctgctgaccaccggacgcatc
ctcagccagtacaacgtcggcgcccagacccgacgcaccgacaacgtggcctggcacgag
gaggaccggttggagattcacccaaccgacgcagagaaccgcgggatcgtcgacgaagac
tgggtgggtatcggcagccgtgccgggcagacggtactgcgcgcgaaggtgaccgagcgg
gtggcaccgggcgtggtctacaccacgttccacttccctgaatcgggcgccaacgtgatc
accaccgacaactccgactgggcgaccaactgcccggaatacaaggtgacggcggtcgag
atcgtgcgagtcagccagccttcggaatggcagaagcgctaccaggccttcagtgatgaa
cagggacgcttgctcagggaacgtcgccatgccgagaaagccgaggtgcgtcgatga
DBGET
integrated database retrieval system
