Pseudomonas ogarae: PSF113_3285
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Entry
PSF113_3285 CDS
T01734
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
pfe
Pseudomonas ogarae
Pathway
pfe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSF113_3285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_3285
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSF113_3285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
UVR
HHH
HHH_2
HHH_3
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AEV63284
LinkDB
All DBs
Position
3870777..3872600
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AA seq
607 aa
AA seq
DB search
MTDLFDPSAFLSTCSGRPGVYRMFDGDARLLYVGKAKNLKKRLASYFRKTGLAPKTAALV
GRIAQIETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGAFPRLSIHRG
AKKAKGRYFGPYPSAGAIRESLSLLQKTFFVRQCEDSYYKNRTRPCLQYQIKRCKAPCVG
FVEPQVYAEDVRHSVMFLEGRSNALTDELSAAMEDAAVNLEFERAAELRDQISLLRRVQD
QQSMEGGSGDVDVIAAFINPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVAEVMAAFLG
QYYISSPERDLPAELIVNVVHEDFPALIEAIDKLRGRELTISHRVRGTRARWQQLAVTNA
EQALGARLANRQHVAARFDALADVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRYNIEGVTPGDDYAAMHQALMRRFGKLKDGEGKLPDILLVDGGKGQLSMARDVLN
ELMVPDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIEEIAKAPGISKKLAESI
YANLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctgtttgatccaagcgcgttcctgtccacttgcagcggtcgccccggcgtg
taccgcatgttcgacggcgacgcacgcctgctttatgtcggcaaggccaagaacctcaag
aagcgcctggccagttactttcgcaagaccggcctcgccccgaagactgccgccctggtg
gggcgtatcgcgcaaatcgaaacgacgatcaccgccaatgaaaccgaggcgctgctgctt
gagcagacgctgatcaaggaatggcgcccgccgtacaacattctgctgcgcgacgacaaa
tcctacccgtatgtgtttctgtccgacggggcctttccgcgcctgagcattcatcggggt
gccaaaaaggccaagggtcggtatttcggtccttatcccagcgccggggcgattcgtgaa
agcctcagcctgctgcagaagacctttttcgttcgccagtgtgaagacagctactacaag
aatcgcacccggccctgcctgcaataccagatcaagcgctgcaaggcgccttgcgtgggg
tttgtcgagccgcaggtctacgccgaggacgtgcgtcactcggtgatgttcctggagggc
cgcagcaatgcgctgaccgatgaactgtcggcagccatggaggacgcggcggtcaacctt
gagttcgagcgggccgccgagctgcgcgaccagatcagcctgctgcgccgcgtgcaggac
cagcaaagcatggaaggaggcagtggtgatgtcgatgtgatcgctgcgttcatcaacccg
ggcggcgcttgcgtgcatttgatcagcgtgcgcggcggtcgtgtgctgggcagcaagaac
ttctttccccaagtgggtatcgaggaggacgtggccgaggtcatggcggcgtttctgggc
cagtactacatcagcagcccggaacgcgacttgcctgccgagttgatcgtcaacgtggtc
cacgaggatttcccggccctgatcgaagccatcgacaagcttcgcggtcgtgaactgacc
atcagccaccgcgttcgtggcacccgtgcccgttggcagcaattggccgtgaccaacgcc
gaacaggccctgggcgcgcgcctggccaaccgtcagcacgtggcggcgcgattcgatgcc
ctggccgatgtcctcaacctggacgagccgccgcagcggctggagtgctacgacatcagc
cattccagtggcgaggcaacggtggcgtcctgcgtggtgttcggtccggaaggcccgatc
aagtccgattatcgccgttacaacatcgaaggcgtcacccccggcgatgactatgcggcg
atgcatcaggcattgatgcgccggttcggcaagctcaaggacggggagggcaagttgccc
gacatcctcctggtggacggtggtaagggccagttgtccatggcccgcgatgtgctcaat
gagctgatggtgcccgacctgatcctgctgggcgtggccaagggcgcgacgcgcaaggcc
ggcttcgagaccttgtacctgaacgacgcagcgcatgagttcaccctcaagggcgattcg
ccagcgttgcacctgatccagcagatccgtgacgaagcccaccgtttcgccatcaccgga
caccgtgcccgccgtggcaagacgcgccggacgtctacactggaaggtgtggcaggcgtc
gggccgacgcgccgtcgcgacttgttgaaacattttggtggattgcaggaactgtctcgt
gccagcatcgaggagatagccaaagcacccggtatcagtaaaaagctcgctgagtcgatt
tatgcaaacctgcacagcgagtag
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