Pseudomonas ogarae F113: PSF113_3460
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Entry
PSF113_3460 CDS
T01734
Name
(GenBank) mhp operon transcriptional activator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfe03000
]
PSF113_3460
Transcription factors [BR:
pfe03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PSF113_3460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
TrmB
MarR
MarR_2
DUF2250
HTH_5
HTH_20
HTH_23
HTH_Crp_2
HTH_24
RPA_C
Dimerisation
Rrf2
z-alpha
FUR
HAAS
HTH_Cmi2_C
HTH_27
Phage_rep_org_N
PadR
Motif
Other DBs
NCBI-ProteinID:
AEV63462
LinkDB
All DBs
Position
complement(4071116..4071901)
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AA seq
261 aa
AA seq
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MTYKTICSLDRGLKVLEYLNTVRASTAHDIATQLRLPRPTVYRILETLEDRGLLYRSVSD
SVFRLTNAVRHLSEGFTDEEWIRTLGAPLLQRLGEKVLWPTDLATFENDAMIIRESTHSF
SPFSVDVGMIGRKRHLLKSPLGRAYLAFCPEDEREDILASLRCSQDPDNALSRDEAFLQK
MISSSHANGYSNCRDLEHPKCASIAVPIMYKQSVIACINIVWVAATIDYDEVVSRYLPDL
LQTKLDMEAGLIKMGFERSRG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacttacaagacaatttgttcgttggatcgagggctcaaagttctcgagtatctcaat
accgttcgcgcctccaccgcgcacgacatcgcgacccagctccgactgccaaggcctacc
gtttatcgcatcctggaaactctggaagaccgcggcctgctttatcgcagtgtgtcggac
agcgtgtttcgcctgacgaatgccgttcgccacttgagcgaaggcttcaccgatgaagaa
tggattcgcaccctcggcgcaccactgctgcaacgcctgggtgagaaagtcctatggccg
accgacctggcgacgtttgaaaacgacgcgatgatcatccgcgaaagcacccacagcttc
agcccgttctccgtcgatgtggggatgatcgggcgcaagcgccatcttttgaaaagtccg
cttgggcgcgcgtatctcgcgttttgtcctgaggacgaacgcgaggacattctggcctcg
ctgcgctgctcgcaggatccggacaacgccttgagtcgagacgaggcatttctgcaaaaa
atgatcagcagctcgcatgccaacggctatagcaactgccgggacctggagcaccccaag
tgcgccagcatcgcagttcccatcatgtacaagcagagcgtgatcgcgtgcatcaacatt
gtctgggtggctgcgaccattgattacgatgaggtggtcagccgttacctgccagacctc
ttgcagaccaagctcgacatggaagccggcctgataaagatgggtttcgaacgttcacgc
ggataa
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