Pseudomonas ogarae F113: PSF113_3655
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Entry
PSF113_3655 CDS
T01734
Symbol
sbcD
Name
(GenBank) SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_3655 (sbcD)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSF113_3655 (sbcD)
Archaeal homologous recombinant proteins
PSF113_3655 (sbcD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEV63656
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All DBs
Position
complement(4300730..4301974)
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLTQEKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANSKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDITLDGETLVKVEPRLIPRAVNLQRLGPAPLADLLVQL
KELPDIDLLADVQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIGAEYAGNGGAG
SADDGSALVELDQLSPQELFSRAWQDTYGNEVDEQTLKDFAVLLQDVQMESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctggggcaaaacctgcacggccaggaacgc
gatttcgaacacgcctgcttcctcgactggctgctgcgtcagctgacccaagaaaaaccc
gacgtgctgctgatcgccggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gaacggctgtacgatttcatcgtcagcgcccatgaacaaaacgccaacctgaccatcgtg
atgatcgccggcaaccacgactccggttcgcggatcgagctgcctgcgccactgatgcgg
cgcttgcgcacccatgccctgggccgggtgctgtggctggacgacggccaactggatgtc
gagcgcctgctgctgccgttgcccgatgccaaaggcaaggtcaaggcgtggtgcctggcc
ctgccgttcctgcgccccgccgaagttaccggtgcgcaactgggcgacgactacctgcga
ggcatcggccaggtgcatgagtggctgatcgccgcggccaacagcaagcgcaagaaaggc
caggcgctgatcgccatcagccatgcgcacatggccggcggttcggtgtccgaggactcc
gaacgcagcctgatcatcggcaacgccgaggccctgcccgccagcctgttcggcccgagc
atcagctacgtcgccctcggccacttgcacaagccgcagaaggtcaacggtgaagagcgt
atccgctacagcggttcgccgatcccgctgtcattttcggagatcggctatcagcatcag
atcctcgacatcaccctggacggcgaaaccctggtcaaggtcgagccgcgcctgatccca
cgggccgtcaacctgcaacgcctgggcccggcgccgctggccgatctcctggtgcaactc
aaggaactgcccgacatcgacctgttggccgatgtccagcgccaaccctggctggaagtg
cgcgtgcgcctcgacgaaccgcagccggacctgcgtcaccaggtggaaaccgcactgcaa
ggcaaggccgtacgcctggtgcggatcggcgccgagtacgccggcaacggcggcgccggc
agtgccgatgacggcagcgcgctggtggagctggatcaactcagcccgcaggagttgttc
agccgcgcctggcaggacacctacggcaacgaagtggacgaacagaccctcaaggacttt
gccgtgctgttgcaagacgtgcagatggagagcgagcagccatga
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