Pseudomonas ogarae F113: PSF113_3727
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Entry
PSF113_3727 CDS
T01734
Name
(GenBank) Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00470
D-Amino acid metabolism
pfe01100
Metabolic pathways
Module
pfe_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSF113_3727
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GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
GIDA
NAD_binding_8
HI0933_like
FAD_binding_2
DAO
Pyr_redox_3
NAD_binding_9
Thi4
AlaDh_PNT_C
FAD_binding_3
Lycopene_cycl
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
AEV63728
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Position
complement(4412501..4413757)
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AA seq
418 aa
AA seq
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MNETTDLLIIGAGPAGMAAALAAASSGARIVLLDDNPLPGGQIWRDGPQANLPSAARRLR
EQLQTCANVRCHAGARVIACAADKTLLVEDAERGWQISYERLILCTGARERLLPFPGWTL
PGVTGAGGLQALIKGGLPVRGERLVIAGSGPLLLASAATAKHQGAQVLRIAEQASRTAVG
GFAAQLPRWPGKFFQSFSLFDRHYRTDTHVVEALGRERLEGVRLHQQGKTIELACDRLAC
GFGLIPNTQLGQALGCAVEDQALAVDAWQATTRREHYAAGECTGFGGSELALVEGAIAGH
AAVGNSAAAQQLWPRRARWQGFARALNTAFALDPRLKTLARSDTLVCRCEDVPYGELVGH
ENWREAKLASRCGMGACQGRVCGAAMEHLFGWTPPAPRPPFSPARIDTLLDLEETPPT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaccaccgacctgctgatcattggcgccggccccgccggcatggccgccgcc
ctcgccgcagccagcagcggcgcgcgcatcgtgctgctggacgacaacccgctgcccggt
gggcagatctggcgcgacggcccccaggccaacctgcccagcgccgcccgacgcctgcgc
gagcaactgcaaacctgcgccaacgtacgctgccatgccggcgcccgtgtgatcgcctgc
gcggcggataaaaccttgctggtggaagatgccgagcgcggctggcagatcagctacgag
cgcttgattctctgcaccggtgcccgcgaacggctgctgccgtttcccggctggacactg
cccggcgtgaccggtgctggcggcttgcaggcgctgatcaagggcggtttgccggtgcgc
ggcgaacggctggtcatcgccggcagcggccccttgctgctggccagcgccgccaccgcg
aagcatcaaggcgcacaggtgttgcgcatcgccgagcaggccagtcgcaccgctgttggc
ggtttcgccgcgcaactgccgcgctggccggggaagtttttccaatcgttcagtctgttc
gaccggcactaccgcaccgacacccatgtggtggaggcgctcggtcgggaacggctggag
ggcgtgcgcctgcatcagcaaggcaagacgattgaattggcctgcgaccggctcgcctgt
ggcttcgggctcattcccaatacccaattaggccaggccctgggctgcgcggttgaagac
caggcgctggcggttgacgcttggcaagcgaccactcgccgtgaacattacgcggcaggc
gaatgcaccggttttggcggcagcgaactggcactggtggaaggcgccatcgccgggcat
gccgccgtcggcaatagcgccgccgcccagcagctgtggccgcgacgcgcacgttggcag
ggtttcgcccgggccttgaacacggcgttcgccctcgatccacggctcaagaccctggcc
cgcagcgacaccctggtctgccgctgcgaagacgtaccgtacggcgaactggtcggccac
gaaaactggcgcgaagcgaaactggcaagccgctgcggcatgggcgcctgccagggccga
gtgtgcggcgccgccatggaacacctgttcggctggacaccgcccgcaccccgccccccc
ttcagcccggcgcgaatcgacaccttgctggacctggaagaaaccccacccacctga
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