Pseudomonas ogarae F113: PSF113_3749
Help
Entry
PSF113_3749 CDS
T01734
Symbol
nirL
Name
(GenBank) NirL
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00860
Porphyrin metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSF113_3749 (nirL)
Enzymes [BR:
pfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
PSF113_3749 (nirL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AEV63750
LinkDB
All DBs
Position
complement(4436728..4437240)
Genome browser
AA seq
170 aa
AA seq
DB search
MKNALSEQQSLALRRLLETGLPLTSRPFQALAEQIEASEPQVLEQVQHWHEQGLFRRVGL
VVNHRALGFAANAMLVLDVPDALVDEVGRRLGQAPGISLCYQRPRRLPQWQYNLFCMIHG
RQRDRVETQVQALLEEHQLDDLPHQLLFSTHLFKQCGGRFAAPAGARIDG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgccctgagcgaacaacagtcactggcactgcgccgtttgctggaaaccggc
ctgcccctgacatcgcgtcccttccaggccctggccgagcagatcgaggccagtgagccg
caggtgctcgagcaggtgcagcattggcatgaacaggggttgttccgccgtgtcggcctg
gtggtcaaccatcgcgccttggggtttgccgccaacgccatgctggtgctggacgtgccg
gacgccttggtcgatgaagtcggccgacgtctcggacaggcaccgggcatcagcctttgc
taccaacgccccaggcgcctgccccagtggcaatacaacctgttctgcatgatccacggt
cgccagcgtgaccgtgtcgagacccaggtccaggcgttgctggaagaacaccagctggac
gacctgccccaccagttgctgttcagcacgcacctgttcaagcaatgcggcggacgtttc
gccgccccggccggagcccgtatcgatggatga
DBGET
integrated database retrieval system
