Pseudomonas ogarae F113: PSF113_3938
Help
Entry
PSF113_3938 CDS
T01734
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSF113_3938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_3938
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSF113_3938
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSF113_3938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
BstA_C
Motif
Other DBs
NCBI-ProteinID:
AEV63935
UniProt:
A0ABM6R2Q9
LinkDB
All DBs
Position
complement(4635745..4636539)
Genome browser
AA seq
264 aa
AA seq
DB search
MKNLRIATFNINGIRARLPNLLEWLEREKPDIACLQELKAVDKDFPAAELESVGYGAIWH
GQASWNGVAILARDAQPLESRRGLPGGDNDSHSRYLEAAVHGVLVGCLYLPNGNPQPGPK
FDYKLAWFERLIEYAQGLQASDHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPESRACY
QRLLDQGWTDSLRHLYPDERIYTFWDYFRQHWQKNSGLRIDHLLLNPVASAYLSEAGVDA
WVRNQPHPSDHAPTWIRLASRKRR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccttcggatcgcgaccttcaacatcaatggcatccgggcccggctgcccaac
ctgctggaatggctggagcgggaaaaacccgatattgcctgtttgcaggagctcaaggcc
gtggacaaggatttcccggcggcggagctggagtcggtcgggtatggggcgatctggcat
gggcaggcgtcctggaacggtgtcgcgatcctggcccgtgacgcgcagccactggagagc
cgccgaggcctgcccggcggggataacgacagccacagtcgctatctggaggcggcggtg
catggcgtgctggtgggctgcctgtatctgcccaacggcaacccgcaaccgggtcccaag
ttcgactacaagctggcgtggttcgaacggctcatcgagtacgcccaagggttgcaggcc
agcgatcatcccgtggtactggccggcgactacaatgtggtgcccactgacatggacatc
tacaacccgcgctcctggctcaaggatgcgctgctgcagccagaaagccgcgcgtgctac
cagcgactgctggaccagggctggaccgattcgttgcgccacctgtatccggacgagcgg
atctacaccttctgggattattttcgccagcattggcagaagaactccgggctgcgcatc
gatcacctgctgctcaatccggtggccagcgcctacctgagcgaggccggcgtggacgcc
tgggtccggaatcaaccccaccccagcgaccatgcccccacttggatccgcctggcttca
cgcaagcggcggtga
DBGET
integrated database retrieval system
