Pseudomonas ogarae F113: PSF113_3940
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Entry
PSF113_3940 CDS
T01734
Name
(GenBank) Ribonuclease precursor
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_3940
Enzymes [BR:
pfe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
PSF113_3940
Transfer RNA biogenesis [BR:
pfe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PSF113_3940
Prokaryotic type
PSF113_3940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
S_4TM
Motif
Other DBs
NCBI-ProteinID:
AEV63937
UniProt:
A0ABN5GBC5
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All DBs
Position
complement(4638550..4639209)
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AA seq
219 aa
AA seq
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MKQRLAIVVLIVLTLGSMGAANARESGNARAQSVAGVFDYYLLALSWSPTFCLTHQKDAQ
CSGKGYGFVLHGLWPQYTRGGWPQSCAPQVSLTAAEQQKGLTLFPTRKLMAHEWSKHGTC
SGLGAMGYLEVTDKALGAVKIPPQLQPFNSSYYFEADEIIRLFRQSNPGIAPDGIAVICS
GPQLSEVRVCMDKDLAFAACGRGVRTQCRAGEIRVPPVR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacgtcttgccattgtcgtactgatcgtactgacactgggttccatgggcgcg
gccaatgcccgcgaatccggcaatgcacgggcgcaatccgtggccggagtgttcgattac
tatttgctggcgctgtcctggtcgccgacgttctgcctgactcaccagaaggatgcgcag
tgttccggcaagggctacggctttgtgctccatggcctctggccgcaatacacccggggc
ggctggccgcaatcctgtgcgcctcaggtgtcgctgacggcggcggagcagcagaagggc
ctgaccttgtttcccacccgcaagttgatggcgcatgaatggtccaagcacggcacttgc
agtggcctgggcgccatgggctacctggaggttaccgataaagccttgggcgcggtgaaa
atcccaccgcagctgcaaccattcaattcctcgtattatttcgaggcagatgaaatcatc
cggctgttccgccaaagcaatccaggcattgcgcccgacggtattgcggtgatttgcagc
gggccgcaactgtcggaagtgcgggtgtgcatggacaaggacctggcgttcgccgcgtgt
ggcaggggtgtcaggacacaatgccgggccggggagatccgggtgccgccggtacggtga
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