Pseudomonas ogarae F113: PSF113_3978
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Entry
PSF113_3978 CDS
T01734
Name
(GenBank) SNF2-like protein
Organism
pfe
Pseudomonas ogarae F113
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Lactamase_B_5
SWIM
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
AEV63975
LinkDB
All DBs
Position
complement(4681617..4684904)
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AA seq
1095 aa
AA seq
DB search
MTQPIEALLESDWGESFHQRYLERGFDYAERARVRILRIDEQSIHAECEGGGENVYQQVI
ALTRYRGYDGVRYECSCPVGDSCKHCAAVMFHLISNPQALGAGSASERLNSELETWIKCI
PERGADSLPSKKDADLRIFYKLKKTHLGQWLLELFKGRQLDDGSLKDLKAFGQLTDMLNR
FPNYMSDVDKQIGQSLISSQHYHSQNSFPLQGRSGAEVLALALQSSRLFLDFDPPQPLGA
GPLKNAQFFWAEQANGNYRPRWRSGDQVLDNLLVLEPLHYLDLSRRELSRLSYEVDDKLA
CHLCHAPEVPARDVVLFSHRINAVDRPIPPPKELTERIIEGVEPRAVLTLGSAINFRHWK
SVPEHRAALTFIYDGHVADDKASTELSILSGTEILRIERKPDVEQAFRTVLRKVGFKKAT
RKSLALADIGGELFQMADDDAWLAFMDKGLLRLRAANWQIDIEAGFHFDLQPVEQLYADI
EESPGREWFDLQLGIVVDGKRHSLLPILLHLLRSSPEMLDSDNRDRRGDEQLMLLDLNGG
KFGRPSVKVALPYGRVKPLMATLGELYMKEHRGDSIRLSAFDAARLNGLEGVPLTWQGGE
RLRTFAKRLHESTHAHVPAPAGLKATLRPYQLEGLNWMQTLRELEVGGILGDDMGLGKTL
QTLAHLLCEKQAGRLDVPALAVMPTSLIPNWLDEAARFAPQLNVVALHGAARQKDFASLA
QYDLVLTTYALLPRDLEVLKPQAWSVLILDEAQNIKNPISKAAQAARELNARQRLCLSGT
PLENHLGELWSLFHFLLPGWLGDSKSFNRDYRTPIEKHGNSERMRHLTARIKPFLLRRKK
EQVATELPPKTEIVHWVELSEGQRDVYETVRVAMDKKVRDEIARSGVARSQIIILDALLK
LRQVCCDLRLLNTVQTAKALRSGSGKLASLMEMVDELRSEGRKILLFSQFTSMLALIEEE
LQKRSLTYSLLTGSTTDRRTPVRDFQSGKVSLFLISLKAGGTGLNLTAADTVIHFDPWWN
PAVENQATDRAYRIGQNNPVFVYKLIARGTVEEKIQALQQDKAALAGSVLDGGAMGGWKL
EQSDIEALFAPLPKA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccaattgaggcgcttcttgagagtgattggggagaatccttccatcaacgt
taccttgagcgcgggttcgactacgccgagagggcgcgagtacggatactgcggatagat
gagcaatcgattcatgccgaatgcgagggtggcggcgagaatgtctatcagcaggtgatc
gcgctcactcgttatcggggatacgacggcgttcgttacgaatgctcgtgcccggtcggc
gacagctgcaagcactgcgctgccgtcatgttccatttaatatcgaatccgcaagcactg
ggggccggctccgccagcgagcgcctgaattctgaacttgaaacctggatcaagtgtatt
cccgagcggggcgccgattcgctacccagcaaaaaagacgccgatctccggatcttctac
aaactcaagaagacgcacttagggcagtggcttttggagctattcaaggggcgccagctc
gatgatggttccctgaaggatttgaaagcgtttggccaactgacagacatgctgaatcgt
tttccgaattatatgtccgacgtcgacaagcaaattggccagtcgcttatcagtagtcag
cattatcacagccagaacagtttcccgttgcaaggtcgcagtggcgccgaggtgctggcg
ctggcattacagtcctcacgcttgttcctggatttcgacccgccgcagccattgggcgca
ggtccgctaaaaaatgcgcagtttttctgggcggagcaggccaatggcaactatcggcct
aggtggcgcagtggcgatcaggtactggataacctcctggtgcttgagccgcttcattat
ctggatttatcgcgtagggaacttagccggctgtcctatgaagtggacgacaaattggcg
tgccatttatgccatgcgccggaggtacccgctcgggatgtcgtgcttttcagccatagg
atcaacgctgtcgaccgacctatcccgccgccgaaagaactgactgagcgcatcatcgaa
ggtgttgaaccgcgagcggtgttgacgttgggaagtgcaatcaacttccggcactggaaa
tctgttccagagcatcgcgcggcactgacctttatttatgatggtcatgtggcggacgac
aaagcatccaccgagctgtcgatcctgtccggaaccgaaatcctgcgcattgagcgtaaa
ccggatgtcgagcaagcgtttcgcaccgttctgcgtaaggtaggtttcaagaaagccact
cgcaagagcctagcgctggcggacatcgggggtgagctgtttcaaatggcggatgacgac
gcctggttggccttcatggacaaaggcctgctgcgattgcgtgccgccaattggcagatc
gatatcgaagcgggctttcatttcgatctgcaaccggtggagcagttgtacgccgacatc
gaggagtctcccggtcgagagtggttcgatttacaactgggtattgtcgttgatggaaaa
cggcacagtctgctgccgatcttgcttcatctgcttcgttcaagccccgagatgctggat
tcggacaaccgtgatcggcgcggtgatgaacagttgatgttgctcgatctcaacggcgga
aaattcgggaggcctagtgtgaaggtcgcgttgccatacgggcgggtcaagccgctgatg
gcaacgcttggcgagttgtacatgaaggagcatcggggtgactcgatacggctgagcgcc
tttgatgcggccaggttgaatgggctggaaggcgtgccattgacctggcagggtggggag
cggttgcgcacgttcgccaagcgattgcatgagtcgactcacgcacatgtgcctgcgcca
gcagggctcaaagccacgctgcgaccttatcagcttgaagggctcaactggatgcagacg
ctgcgtgagctggaagtcggcggcatcctgggcgatgacatgggcttgggtaaaaccttg
cagacactggctcacctgctttgcgagaagcaggccgggcgcctggatgtaccggcgctg
gcggtcatgcccaccagccttattcccaactggcttgacgaagccgcgcgctttgcaccg
cagctcaacgtcgtggcgctgcatggcgcagcccggcaaaaagatttcgccagccttgca
cagtacgatctggtattgacgacttatgccttgttgccacgggatctggaggtgctaaag
ccccaggcctggagtgtgctgattctcgatgaagcacagaacatcaagaaccccatcagc
aaggccgcccaggctgcccgcgaactcaatgcccggcagcgcctgtgcctgtccggtacg
cccctggaaaatcatttgggcgaactttggtcgctgtttcatttcctgctgccaggctgg
ttgggggatagcaaaagtttcaatcgggactatcgaacgccgatcgaaaagcacggtaat
agcgagcgaatgcgacatctgacggcgcggataaaaccgtttctactgcggcgtaaaaag
gaacaagtcgctactgaactgccacccaagactgaaatcgtccattgggtcgaactcagt
gaggggcagcgggatgtctatgaaaccgtgcgcgtagccatggacaagaaggttcgggac
gaaatcgcccgcagcggcgtggcgcgtagccaaatcatcatcctcgatgcattgctcaag
ttacgtcaggtttgctgcgacctgaggttgctcaatacggtgcagacggccaaagcgttg
cgttccggtagcggcaagctggccagtttgatggaaatggttgatgagttgcgcagcgag
gggcgcaagattctactgttttcccaattcacctcgatgctggccttgattgaagaggag
ctgcaaaagcgaagccttacctattcgttattgaccggctccaccacggatcgccgcacc
ccggtgagggactttcagagcggcaaggtgtcgcttttcctgatcagtctgaaggcgggc
ggtacagggctcaatctgacggctgccgacacggtgattcattttgatccttggtggaat
cctgcggtggaaaaccaggccaccgaccgagcttaccggattggacaaaacaaccccgtg
ttcgtctacaagctgattgcccgaggcaccgtggaagagaagatccaagcccttcagcag
gataaggctgcgttggctggcagtgtgctggacggtggagcaatgggtggatggaagctt
gagcagagcgatatcgaagcgctgtttgcgccgttgcccaaggcctga
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