KEGG   Pseudomonas ogarae F113: PSF113_4088
Entry
PSF113_4088       CDS       T01734                                 
Name
(GenBank) helix-turn-helix dna-binding domain protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pfe  Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfe03000]
    PSF113_4088
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfe02048]
    PSF113_4088
Transcription factors [BR:pfe03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PSF113_4088
Prokaryotic defense system [BR:pfe02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    PSF113_4088
SSDB
Motif
Pfam: HTH_3
Other DBs
NCBI-ProteinID: AEV64088
LinkDB
Position
complement(4816995..4817483)
AA seq 162 aa
MSAAWNEFQTVIATLGELHALLDRLRGEFVRGIKTPADYERATDLLDALTDGRELSKTEE
EILVELEDEILGYQRNCEQFRESNAAFEATCTPVQLIKDLMETLGLTGSDLPEIGDKTAV
SKVLNGDRPISHKMAYALAERFAMEPSAFLTAASAKVTAHIE
NT seq 489 nt   +upstreamnt  +downstreamnt
atgagcgcagcctggaacgaatttcaaaccgtgatcgcaacgcttggcgagctacatgcg
ttactggatcgcctgcgcggtgagtttgtgcgtggcatcaagacccctgcggactatgag
cgtgcgaccgacctgctcgatgcgctcaccgacgggcgcgaactgagcaagaccgaggag
gaaattctcgttgagctcgaggacgaaatcctgggctaccagcgcaactgcgaacagttt
cgcgagtcgaatgccgcttttgaggcgacctgcacgcctgtgcaattgatcaaggatctg
atggagacgctcgggctcaccggttcagacctccctgaaatcggtgataaaacggcggtg
tccaaagtgctcaatggcgatagacctatcagccacaagatggcgtatgcgctggcggag
cggtttgcgatggagccgagtgctttcttgactgcggcctcagcaaaggtgacggctcat
atcgaatga

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