Pseudomonas ogarae F113: PSF113_4100
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Entry
PSF113_4100 CDS
T01734
Name
(GenBank) 3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00071
Fatty acid degradation
pfe00280
Valine, leucine and isoleucine degradation
pfe00310
Lysine degradation
pfe00362
Benzoate degradation
pfe00380
Tryptophan metabolism
pfe00410
beta-Alanine metabolism
pfe00640
Propanoate metabolism
pfe00650
Butanoate metabolism
pfe00907
Pinene, camphor and geraniol degradation
pfe00930
Caprolactam degradation
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01120
Microbial metabolism in diverse environments
pfe01200
Carbon metabolism
pfe01212
Fatty acid metabolism
Module
pfe_M00087
beta-Oxidation
pfe_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSF113_4100
00650 Butanoate metabolism
PSF113_4100
09103 Lipid metabolism
00071 Fatty acid degradation
PSF113_4100
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSF113_4100
00310 Lysine degradation
PSF113_4100
00380 Tryptophan metabolism
PSF113_4100
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSF113_4100
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSF113_4100
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSF113_4100
00930 Caprolactam degradation
PSF113_4100
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSF113_4100
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSF113_4100
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSF113_4100
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
AEV64100
UniProt:
A0ABM6R384
LinkDB
All DBs
Position
complement(4828104..4830248)
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AA seq
714 aa
AA seq
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MTDAIRYETGQDRIVILTLDMPGQSANTMNAVYREAMAACVARLQAEKDSIAGVIITSAK
HTFFAGGDLNELIKVGKPEAKAFYDMVLRLKAQLRALETLGKPVVAAINGAALGGGWEIC
LACHHRVALDLPSVQLGLPEVTLGLLPGGGGVVRMVRLLGLEKALPYLLEGKKVNAQQAL
QAGLLDELAKDRDELLAKSRAWILANPSVIQPWDAKGYRLPGGTPSDPKVAQMLAIAPSI
LRNKTQGCLPAPEKILCAAVEGAQVDFDTAHLIETRYFTELTTGQVAKNLIGTFWFQLNE
IKAGGSRPQGFAPYLTKKVGVLGAGMMGAGIAYVSAVAGIAVVLKDVDVAAAEKGKARSA
ALLDKKVARGQLTAEQREATLARIHPTDSNADLAGCDLIIEAVFEDRALKASVSAAAQAV
VGDDAVIASNTSTLPITGLAMAVPDPTKFIGLHFFSPVEKMPLVEIIKGARTSDATLARG
FDFVLQINKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGVSAPMIETEARKAGMPVGPL
AISDEVSLSLMSHIRAQTAKDLRAEGKTPIEHPAFAVIDLLLNEYKRPGKAAGAGFYEYP
ANGQKYLWPQLKSRFEQADGQISPQDIRDRLLFIQALETVRCVEEGVLTSTADANVGSIF
GIGFAAWTGGALQFINQYGLQDFVGRAQYLAEQYGERFSPPALLLEKAARHELF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccattcgttacgaaaccggccaggaccggatcgtcatcctgaccctggac
atgccgggccagagcgccaacaccatgaacgcggtgtaccgtgaggccatggctgcctgc
gtcgcccgtttgcaggctgaaaaggactcgattgccggtgtgatcatcacctcggccaag
cacaccttcttcgccggcggtgacctcaacgaattgatcaaggtcggcaagcccgaggcc
aaggctttctacgacatggtcctgcggcttaaagcgcaactgcgagccttggagaccttg
ggcaagcccgtggtggcggccatcaatggcgcggccctcggcggtggttgggaaatctgc
ctggcctgccatcatcgcgtggccctggacctgccgtcggtgcagctcggcttgccggag
gtcacgcttggcctgttgccaggaggtggcggggtggtgcggatggtgcgcctgctcggt
ttggaaaaggccttgccgtatctgctcgagggcaagaaggtcaatgcgcaacaagcgctg
caggccggtttgctcgatgagctagcgaaggatcgtgacgaactgctggccaaatcccgg
gcctggattcttgccaaccccagcgtcatccaaccctgggatgcaaagggctatcgactg
ccgggcggcacgccgtctgacccgaaagttgcgcaaatgctggctatcgccccttcgatc
ctgcgcaacaagacccagggttgcctgccagcaccggagaaaatcctctgcgcagcggtg
gagggcgcccaggtagatttcgacaccgcgcacctgatcgaaacccgctacttcaccgaa
ctgaccaccggccaggtggcgaagaacctgattggcaccttctggttccagctcaacgag
atcaaggccggtggttctcgcccacagggttttgcgccttatctgacgaaaaaagtcggt
gtgctcggcgcgggcatgatgggggcgggtatcgcctatgtcagcgccgtggccggcatc
gccgtggtactcaaggatgtcgatgtggcggcggccgagaagggcaaggcccgttcggcg
gcgttgctggataaaaaggtcgcccgcggccaactcaccgccgagcagcgcgaagccacg
ctggcgcggattcaccccaccgacagcaacgcagacctggccggctgcgacctgatcatc
gaagcggtgtttgaagatcgcgccctgaaagccagtgtgtcggccgccgcccaggcggtg
gtgggcgatgatgcggtgatcgcttccaacacctcgaccttgcccatcaccggcctggcc
atggctgtgccggacccgacgaagttcatcggcctgcacttcttcagcccggtggaaaaa
atgcctctggtggagatcatcaagggcgcgcgcaccagtgacgcgaccctggcccggggg
ttcgattttgtcctgcagatcaacaagacgccgattgtggtcaacgacagtcgcggtttc
tttacgtcgcgggtgttcggcacctttaccaatgagggcattgccatgctcggcgagggc
gtgagtgcgccgatgatcgagaccgaagcgcgcaaggccggcatgccggtcgggcctctg
gcgatctctgacgaagtttccctcagcctgatgagccatatccgcgcgcaaaccgccaag
gacctgcgcgcagaagggaaaacgccgattgagcacccggcattcgccgtgattgacttg
ctgctcaacgaatacaagcggccaggcaaggctgccggtgccggtttctatgaatacccg
gccaatgggcaaaagtatttgtggccgcagctcaaaagccgcttcgagcaagccgacggg
cagatttccccacaggatatccgtgatcgcctgctgttcatccaggccctggaaacagtg
cgctgcgtggaggagggcgtgctgacttcgacggccgacgccaacgtcggctcgatcttc
ggtattggcttcgccgcctggaccggtggtgcgctgcagttcatcaaccaatatggcctg
caagactttgtcggtcgcgcccagtatctggccgagcaatatggcgagcgcttctcaccg
ccggccttgttgttggagaaagccgcccgccacgaactgttctga
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