Pseudomonas ogarae F113: PSF113_4241
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Entry
PSF113_4241 CDS
T01734
Symbol
sdhB
Name
(GenBank) SdhB
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00020
Citrate cycle (TCA cycle)
pfe00190
Oxidative phosphorylation
pfe00650
Butanoate metabolism
pfe00720
Other carbon fixation pathways
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01120
Microbial metabolism in diverse environments
pfe01200
Carbon metabolism
Module
pfe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfe_M00149
Succinate dehydrogenase, prokaryotes
pfe_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSF113_4241 (sdhB)
00650 Butanoate metabolism
PSF113_4241 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PSF113_4241 (sdhB)
00720 Other carbon fixation pathways
PSF113_4241 (sdhB)
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PSF113_4241 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AEV64237
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All DBs
Position
complement(4969639..4970343)
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AA seq
234 aa
AA seq
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MLQVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPYLQN
DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTSERLAALDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgctacaaccctgatcaggacgctgcgccgttcatgcag
gaattccaggtcgataccggtggtaaagacctgatggtgctggacgtgctggccctgatc
aaagagcaggacgagggtttctcctatcgtcgctcttgccgcgagggcgtttgcggctcc
gacggcatgaacatcaacggcaagaacggcctggcctgcatcacgccgctgtctgcggtg
gtcaagggcaacaagctgatcgttcgtccgttgccaggtttgccggttatccgtgacctg
gtcgtcgatatgagcatcttctacaagcaatacgagaaggtgaagccatacctgcagaac
gacacgccggctccggccatcgagcgtctgcagtctccagaagagcgtgaaaagctcgac
ggtctgtacgagtgcatcctgtgcgcttgctgctcgacctcgtgcccatcgttctggtgg
aacccggacaagttcctgggcccggccgccctgctgcaagcgtaccgcttcctggcagac
agccgtgacaccaagacgtccgagcgtctggctgcactggatgacccgttcagcgtattc
cgctgccgcgggatcatgaactgcgtcaacgtctgcccgaaaggcctgaacccgactaag
gccatcggtcacgtacgtaacatgctgctgcagagcggcgtgtga
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