Pseudomonas ogarae F113: PSF113_4525
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Entry
PSF113_4525 CDS
T01734
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfe03009
]
PSF113_4525
Enzymes [BR:
pfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PSF113_4525
Ribosome biogenesis [BR:
pfe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSF113_4525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AEV64515
LinkDB
All DBs
Position
complement(5279711..5280946)
Genome browser
AA seq
411 aa
AA seq
DB search
MKDQDQNDSQEIGPAGEKLQKVLARIGVGSRRDVEAWITQGRIKVNGKDATLGLRVDMHD
AITIDGKVIKREEAAETVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPRPKEGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAR
FTDIKQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMG
RWREMSQYEVDILAAEVGLKPVAMPQMTAKSKDKLERMQRKSSRPMGKTERVRTLRPAAE
GAPTGPRPSREPQIEGERPARKPAPRQDGERGPRTPRPANGRTERGEGRGAPAGRGTPVA
DRPADTQRPAKPAPKKRPGIILADRDAPSGKRRGAPAGSGQRPGFGRRKPE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccaagaccagaacgacagccaggaaatcggcccagcaggcgagaagctgcaa
aaagtcctcgcccgtatcggcgtcggctcgcgccgcgacgtggaagcctggatcacccag
ggccggatcaaggtcaacggcaaagatgccaccttgggcctgcgtgtcgacatgcacgac
gccatcaccatcgatggcaaggtgatcaagcgcgaagaggccgccgaaacggtgcgccgc
gtgatcatgtacaacaagcccgacggcgaaatctgcacccgtgacgacccggaaggccgt
ccgaccgtgttcgacaagatgccgcgtccgaaagaaggccgctggatcaacatcggtcgc
ctggacatcaacaccaccggtttgctgatgttcaccaccgacggtgaactggccaaccgt
ttgatgcacccgtcctacgagatggaccgcgaatacgccgtgcgtgtgcgtggcgaagtc
gacgacgagatgatcgagcgcctcaaggccggcgttgtactggaagacggcccggcgcgt
ttcaccgacatcaagcaggcgcccggcggcgaaggcttcaaccactggtaccactgcgtg
gtgatggaaggccgcaaccgtgaagtgcggcgtctgtgggaatcccaggggttggtggtc
agccgcctcaagcgcgtgcgcttcggtccggtgttcctcaattccgacctgccgatgggc
cgctggcgcgaaatgagccagtacgaagtcgacatcctggccgccgaagtgggcctcaag
ccggtggcaatgccgcagatgaccgccaagagcaaggacaagctggagcgcatgcagcgt
aaatcctcgcgcccaatgggcaagaccgagcgcgtgcgtacgctgcgcccggctgccgaa
ggcgcgccgacggggccgcgaccttcgcgcgagccgcagatcgaaggcgagcgcccggcc
cgcaagcctgcaccccgtcaggacggcgagcgtggtccacgcacaccgcgcccggccaat
ggtcgcactgagcgcggcgaaggtcgcggtgccccggctggtcgcggtacgccagtcgcc
gatcgcccggccgacacccagcgcccggccaagccagcgccgaaaaaacgcccgggtatc
atcctggccgaccgcgatgcgccatcgggtaaacgccgtggtgcaccggcaggctctggg
cagcgtccggggtttgggcgtcgtaagccggagtga
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