Pseudomonas ogarae F113: PSF113_4547
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Entry
PSF113_4547 CDS
T01734
Symbol
groEL
Name
(GenBank) GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSF113_4547 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfe03019
]
PSF113_4547 (groEL)
03110 Chaperones and folding catalysts [BR:
pfe03110
]
PSF113_4547 (groEL)
03029 Mitochondrial biogenesis [BR:
pfe03029
]
PSF113_4547 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfe04147
]
PSF113_4547 (groEL)
Enzymes [BR:
pfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSF113_4547 (groEL)
Messenger RNA biogenesis [BR:
pfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSF113_4547 (groEL)
Chaperones and folding catalysts [BR:
pfe03110
]
Heat shock proteins
HSP60 / Chaperonin
PSF113_4547 (groEL)
Mitochondrial biogenesis [BR:
pfe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSF113_4547 (groEL)
Exosome [BR:
pfe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSF113_4547 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PSF113_4547 (groEL)
Exosomal proteins of breast cancer cells
PSF113_4547 (groEL)
Exosomal proteins of colorectal cancer cells
PSF113_4547 (groEL)
Exosomal proteins of bladder cancer cells
PSF113_4547 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEV64537
UniProt:
A0ABM6R4E9
LinkDB
All DBs
Position
complement(5302219..5303862)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKALSKPCADTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVILSKENTTVIDGAGVETDIQARVLQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAISELKGDNDDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKEDAPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcgccggtgtc
aacgtcctggctgacgcagtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtagccaaagaaatc
gagctgaaagaccgcttcgaaaacatgggcgcgcaactggtcaaagacgttgcctcccgt
gccaacgatgacgccggcgatggcaccaccaccgctaccgtcctggctcaatcgatcgtc
aacgaaggcctcaaagccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccatcgccattgtcaaagagctcaaagccctgtccaagccatgcgctgac
accaaggcaatcgctcaggtcggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccggaaaccatgactgccgagctggacggtccgctgatc
ctgctggtcgacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgcccattgctgatcgtggctgaagacgttgaaggcgaagccctggcg
accctggtcgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctccaggc
tttggcgatcgtcgcaaggccatgctgcaggacatcgccgtactgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcaccaccctggagcacctgggtaacgcc
aagcgcgtgatcctgtccaaggaaaacaccaccgtgatcgacggtgccggcgttgagact
gacatccaggctcgcgttctgcagatccgtcagcaagtggccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgcctggccaaactgtccggcggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcgacccgcgcagccgtcgaagaaggcgtggtacctggcggcggcgtggcactggtt
cgcgctctgcaggctatctccgagctcaaaggcgacaacgatgaccagaacgtgggcatc
cagttgctgcgtcgcgctgtagaagcaccgctgcgccagatcgttgccaactccggcgac
gagccaagcgttgtggtcgataaggtcaagcagggttcgggtaactacggttacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggtatcctggacccggccaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccaccgaggcgatg
atcgctgaaatcaaggaagacgctccagctggcggcggtatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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