Pseudomonas ogarae F113: PSF113_4717
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Entry
PSF113_4717 CDS
T01734
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PSF113_4717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfe03019
]
PSF113_4717
03009 Ribosome biogenesis [BR:
pfe03009
]
PSF113_4717
03036 Chromosome and associated proteins [BR:
pfe03036
]
PSF113_4717
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PSF113_4717
Messenger RNA biogenesis [BR:
pfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSF113_4717
Ribosome biogenesis [BR:
pfe03009
]
Eukaryotic type
90S particles
RNase
PSF113_4717
Prokaryotic type
rRNA processing factors
PSF113_4717
Chromosome and associated proteins [BR:
pfe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PSF113_4717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AEV64706
UniProt:
A0ABM6R4X0
LinkDB
All DBs
Position
complement(5491979..5492668)
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQDLMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctctaagccgtctcgagcgccagctcggttacaccttcaaggaccaggac
ctgatgctcctggccctcactcaccgcagttttgccgggcgcaacaacgaacgcctggaa
ttcctcggtgatgccatcctcaacttcgtggccggcgaggcgctgttcgagcgtttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgcgcacgattggtaaaaggtgagactctg
gccgtattggcccgtggtttcgacctgggcgactatctgcgcctgggctccggtgagttg
aaaagcggcggtttccgtcgcgagtcgatcctggccgatgccctggaagcgttgattggt
gcgatctacctggatgcaggcatggaaatggcgcgcgaacgcgtgctggcctggctgacc
tccgagatcgacagtctgacgctggtggacaccaacaaggaccccaagacccgtttgcag
gagttcctgcaatcacgcagttgcgagttgccgcgctacgaagtcgtggatatccagggt
gagccgcattgccgtaccttcttcgttgaatgcgaagttgtcctattgaacgaaaaaagc
cggggtcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga
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