Pseudomonas ogarae F113: PSF113_4725
Help
Entry
PSF113_4725 CDS
T01734
Name
(GenBank) Valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSF113_4725
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfe01007
]
PSF113_4725
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_4725
Enzymes [BR:
pfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PSF113_4725
Amino acid related enzymes [BR:
pfe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PSF113_4725
Transfer RNA biogenesis [BR:
pfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSF113_4725
Prokaryotic type
PSF113_4725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
AEV64714
LinkDB
All DBs
Position
5500790..5503636
Genome browser
AA seq
948 aa
AA seq
DB search
MDKTYQPHAIETSWYNTWESENYFAPQGAGDSYTIMIPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRNTLWQPGTDHAGIATQMLVERRLEAQGQSRHDLGREKFLEKVWEWKDESGG
NISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAI
SDLEVENHDEKGFLWNLKYPLADGAKTAEGKDYLIVATTRPETMLGDSAVAVNPNDERYQ
ALIGKFVELPLVGRRIPIIGDDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDK
NANVLPAAQAFNLDGTLNESVDGQIPAEYAGLDRFEARKQIVAAFDAAGLLVSVDDHALK
VPKGDRSGTIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKHNLGPDVALQQDNDVLDTWFSSGLWT
FSTLGWPQQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYV
HGLVRDGQGQKMSKSKGNVLDPLDIIDGIDLETLVQKRTSGLMQPKLAKQIEKATREEFA
EGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDCGQNG
EAFELTLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW
DENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGAQGKTIMLQPWPV
ANESRIDPAAEDDIEWLKTFMLGLRNIRAEMNIGPGKPLALFLKNASAEDLRRLNENEAL
LKKLAKLESVTVLAAGEEAPLSATALVGEMEVLVPMAGLIDKAAELARLDKEILRLKGEV
QRVGGKLSNAGFVDKAPAEVIEKERAKLAEAEQALGKLAEQHGRIASL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggataagacctaccagccgcacgccattgaaacttcctggtacaacacctgggagtcc
gagaattatttcgctccgcaaggcgcgggcgattcctacaccatcatgatcccgccgccg
aacgtcaccggcagcctgcacatgggccacggtttcaacaacgcgatcatggacgcgctg
atccgtttccggcgcatgcaaggtcgcaacaccttgtggcagccgggcaccgaccacgcc
ggtatcgccacgcagatgctggtggagcgccgcctcgaagcccagggccagagtcgccat
gacctgggtcgcgagaaattcctcgagaaagtctgggaatggaaagacgagtccggtggc
aacatcagccgccagatccgtcgcctcggctcgtccgtggactggagccgcgagcgcttc
accatggatgacggcctctcggaagcagtcaaggaagccttcgtgcgcctgcatgaagac
gggctgatctatcgcggcaagcgcctggtcaactgggacaccaagttgcacacggccatt
tccgacctcgaagtggagaaccacgacgagaaaggtttcctgtggaacctgaagtacccg
ctggccgacggcgccaagaccgccgaaggcaaggattacctgattgtcgccaccacgcgt
ccggaaaccatgctgggcgactccgccgtggcggtgaacccgaacgatgaacgctaccag
gcactgatcggcaaattcgtcgaactgcccctggttggccgtcgcatcccgatcatcggc
gacgactactgcgaccctgaattcggcaccggctgcgtaaaaatcaccccggcccacgat
ttcaacgactacgaagtcggcaagcgccacaacctgccgctgctgaacatcttcgacaag
aacgccaacgtattgccggcagcccaggcattcaacctcgacggcacgctgaacgaaagc
gtcgacggccagatcccggccgaatacgccggcctggaccgcttcgaagcacgcaagcag
atcgtcgcggcgttcgatgccgccggcctgctggtcagcgtcgacgatcacgccctgaaa
gtcccgaaaggcgaccgctccggcaccatcatcgagccgtggctgaccgaccagtggtac
gtatctaccaagccgttggccgaacctgcgattgccgccgttgaagacggtcgcatccag
ttcgtgcccaagcaatacgaaaacatgtacttctcgtggatgcgcgacatccaggattgg
tgcatcagccgccagttgtggtggggccatcgcattccggcctggtatgacgagtcgggc
aaggtctatgtcggccgcgatgaagccgaagtccgcgccaagcacaatctcggcccggac
gtggcgctgcaacaggacaacgacgtcctcgacacctggttcagttccggcctgtggacc
ttctccaccctgggctggccgcagcagaccgagttcctgaagaaattccactccaccgac
gtgctggtcaccggcttcgacatcattttcttctgggtcgcccggatgatcatgctgacc
atgcacctggtgaagaacgaagacggcacgccgcaagtgccgttcaagaccgtctacgtc
cacggcctggtgcgcgacggccagggccagaagatgtccaagtccaagggcaacgtcctg
gacccgctggacatcatcgacggcatcgacctggaaaccctggtgcagaaacgcacctcc
ggcctgatgcagccgaaactggcaaagcagatcgagaaagccacccgcgaagaattcgcc
gagggcatcgccagctacggcaccgacgccctgcgcttcaccttctgctcactggcgtcc
accggtcgcgacatcaagttcgacatgggccgcgtcgaaggctatcgcaacttctgcaac
aagatctggaacgccgcgcgctacgtgctggataaaggcgaagactgcggccagaacggc
gaagcctttgaactgaccctggccgatcgatggatcatttcgcagttgcaacgcaccgaa
gccgaagtgacccgccaactggaccaattccgtttcgacctggccgcacaagccctgtac
gaattcatctggaaccagtattgcgactggtacctggagctgtccaagcctgtgctgtgg
gacgaaaacgcaccggtcgaacgccagcgcggcacccgtcgcaccctggtgcgcgtactg
gaagtggccctgcgcctggcgcatccgttcatgccgttcatcaccgaggaaatctggcag
cgcatcgcaccgctggcaggcgcccaaggcaagacgatcatgctgcaaccgtggccggtg
gccaacgaaagccgcatcgatccggcggccgaagacgacatcgagtggctcaagaccttc
atgctgggcctgcgtaacatccgcgccgaaatgaacatcggcccgggcaagccactggcc
ctgttcctgaagaacgccagcgccgaagacctgcgtcgcctcaacgaaaacgaggcactg
ctcaagaaactggcgaagcttgaatcggtgacggtcctggcagccggcgaagaagcgcca
ctgtcggccaccgccctggtcggcgagatggaagtgctggtgccaatggcgggcctgatc
gacaaggccgcggaactggcacgcctggacaaggaaatcctgcgtctcaaaggcgaagta
cagcgggtcggcggcaagctgtccaacgccggcttcgtcgacaaggcgccggccgaagtc
atcgagaaggaacgggccaaactggccgaggcggaacaggccttgggcaagctggccgag
cagcatgggcggattgccagcctgtaa
DBGET
integrated database retrieval system
