Pseudomonas ogarae F113: PSF113_4976
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Entry
PSF113_4976 CDS
T01734
Name
(GenBank) Multimodular transpeptidase-transglycosylase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00550
Peptidoglycan biosynthesis
pfe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSF113_4976
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pfe01003
]
PSF113_4976
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfe01011
]
PSF113_4976
Enzymes [BR:
pfe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PSF113_4976
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSF113_4976
Glycosyltransferases [BR:
pfe01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PSF113_4976
Peptidoglycan biosynthesis and degradation proteins [BR:
pfe01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PSF113_4976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AEV64959
LinkDB
All DBs
Position
complement(5774883..5777099)
Genome browser
AA seq
738 aa
AA seq
DB search
MLAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFVGQKLSKDDFLTELDALGYRRESV
ANGPGAASVNGNTIDLNTRGFQFYEGMEQAQPVRVRFSGDYVAALTGAKNASLSVVRLEP
LLIGGLYPKNLEDRILIKIDQVPPFLLDTLIAVEDRDFYHHFGVSPKSIARAIWVNTSSG
RMRQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMALLLELHYDKQEILEAYLNEVFVGQD
GQRAVHGFGLASQFFFSQPLSELKLHQVALLVGMVKGPSSYNPRRNPERALERRNLVLDL
LQEQGVATAEQVEAAKKMPLGVTKRGSLADSSFPGFMDLVKRQLREDYRDEDLTEEGLRI
FTSFDPILQMKAEASVEDTFKRLGGRKGADEVEAAMVVTNPETGEVQAMIGSRQASFAGF
NRALDAVRPIGSLIKPAVYLTALEKPSQYTLTSWLSDETFSVKGADGQVWKPQNYDRRSH
GTVFLYQGLAHSYNLSTARLGLEVGVPNVLKTLARLGVSREFPAFPSMLLGAGGLTPIEV
AAMYQTLANGGFNTPMRGIRSVLTADGEPLKRYPFQIQQRFDPASIYLIQSAMQRVMREG
TGSSVYNVLPRTLTLAGKTGTSNDSRDSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGAL
QVWTSFMRKADPLPLDMPQPDNIVQAWVDSRTGQGSDANCPGAVQMPYIRGSEPPPGAAC
GGTNPAESVMDWVKDWMN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccggttttgcggtctatctcgatgccgtggtccaggagaagttctccggcaag
cgctggaccattccggccaaggtctatgcccggccgttggagctgttcgtcggacaaaag
ctgagcaaggatgatttcctgaccgaactcgatgccttgggttatcgccgtgaaagcgtg
gccaacggtccgggtgcggcctcggtcaatggcaataccatcgacctcaatacccgtggt
ttccagttctatgaaggcatggagcaggcgcaaccggtgcgggtgcggttttccggtgat
tatgtcgctgcgctgaccggcgcaaaaaacgcgagcctgtcggtggtgcgccttgagccg
ctgctcattggtggcctgtaccccaagaacctcgaagaccggatcctgatcaagattgac
caggtgccgccgttcctgctcgatacgctgatcgccgtcgaagaccgcgacttctaccat
cacttcggcgtctcgcccaagtcgattgcccgggccatttgggtcaacacctcctcaggc
cgtatgcgtcagggcggcagtaccttgacccaacagttggtcaagaacttctacctgacc
aacgagcgcagcctgacccgcaagctcaccgaagccatgatggcgttgttgctggagctg
cactacgacaagcaggagattctggaggcctacctcaacgaggtattcgtcggccaggac
ggtcagcgggcggtgcacggtttcggccttgccagccagttcttcttcagccagccgttg
tccgagctcaagctgcatcaggtggcgttgctggtgggcatggtcaagggaccgtcttcc
tacaacccgcgtcgtaatccggagcgcgccctcgaacggcgcaacctggtgctcgacctg
ctgcaggaacagggtgtggcgacggccgagcaagtcgaggcagcgaaaaagatgccattg
ggcgtgaccaagcgtggcagcctggcggacagttccttccctggcttcatggacctggtc
aagcgtcagctacgcgaagactaccgcgacgaagacttgaccgaagaaggcctgcgcatc
ttcaccagcttcgacccgatcctgcagatgaaggccgaagcctcggtcgaggacaccttc
aagcgactgggcggacgcaagggcgctgacgaagtcgaagcggccatggtggtgaccaac
ccggaaaccggcgaagtccaggccatgatcggcagccgccaggccagtttcgccggtttc
aaccgggccctggatgcggtgcgcccgattggctcgctgatcaagccggcggtctacctc
accgccctggaaaagccgagccagtacacgctgaccagttggctgtcggacgagacgttc
tcggtcaagggcgccgatggccaggtctggaagccgcagaactatgatcgtcggtcccac
ggcacggtgttcctgtaccaggggctggcgcattcctacaatctgtcgacggctcgcctc
gggcttgaagtcggcgtgccgaacgtcctcaagaccttggcgcgcctgggggtgagtcgt
gaattcccggcgttcccatcgatgctgttgggggccggtggccttacgccgatcgaagtg
gcggccatgtaccagacgctggccaatggcggtttcaacacgccgatgcgcggcatccgc
agcgtgctgaccgccgatggcgagccgctcaagcgttatccgttccagatccagcagcgt
ttcgatccggcctccatttacctgatccagagcgcgatgcagcgggtcatgcgtgaaggc
accggcagttcggtctacaacgtgctgccccggaccctgaccctggcgggcaagaccggt
accagtaacgactcgcgtgacagctggttcgccggtttcagccaggacctgctggccgtg
gtctggctcggacgtgatgacaacggcaagaccccgttcaccggtgccaccggcgcgctg
caggtctggaccagtttcatgcgcaaggccgacccgttgccgctggacatgccgcaaccg
gacaacatcgtccaggcgtgggttgattcgcgcacgggccaaggctccgatgccaattgc
ccgggcgccgtgcagatgccgtatattcgcggcagcgaaccaccacccggtgctgcctgt
ggcggcacgaatcccgccgaatcggtgatggattgggtcaaggactggatgaattaa
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