Pseudomonas ogarae F113: PSF113_5064
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Entry
PSF113_5064 CDS
T01734
Name
(GenBank) sensory box ggdef domain eal domain protein
Organism
pfe
Pseudomonas ogarae F113
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_3
PAS_8
dCache_1
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
AEV65043
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Position
5869551..5873435
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AA seq
1294 aa
AA seq
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MSRQSSKPQDYSLSNVTPPLSPRAPAVVPGSPLRGTLKGGLATLVLLLLGLLFWQLLDQL
RETQQQQRQYTIDYTADLAAQVSLNMALNAQIALNLLPIVEQPQTADEQQALVRKLQQSL
PELRSLALLSPSGRVLSDSDADSHDADYLGELVQRSRAQAHYFSNAEDGSVVHLLLHQAS
GSSRGYWALRLTPNFFSTLTKQADTGMRPLWLVENRLNQQIISRDETLPSSSPAHLSPDD
LKNTVLTVPLSSSDWQLRGLFDRRQVIEQLLPAFIGKCLLGLAFSLLPVIALLNMRRRQR
QLHEGRRRYQDIFEGTGVALCVLDLSGLKAFFERAGLHNGDQLRAWTKTSHQLEQLRQEV
HVTEVNQMALKLLNVDSCDQAWQLLVGKGAQDNNPVGSKLLEALLDQNKQLELEIKLQDA
HGRDQHLWLVLRLPEKQHDYNAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYV
QDVISQRMIFSNHHLGQTLGYDRTELHQMGEYFWEILLHSDDADHYHNLRQEQRRGGYTQ
LLQCQLRFRHRNGKWRCFDIREQALARDRHNQVTRIIGVAKDVTEQIEASESLRDSEQRY
RMLAESISDVIFSTDNKLSLNYVSPSVQAVLGYTADWIFQNGWQSIIANPQQLTGIYSLM
DRVSKALDKPDQLAELRNQMQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVG
RDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQVLDQLPN
MLTVDEQQEAHLRYVLKQLQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVC
FFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSADRQKTWVVLMFLDLDR
FKPINDSLGHAAGDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAI
TVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNN
FQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRR
GLVPPGDFIPVLEELGLVVDVGDWVIAEACRQLRTWHQAKVRVPKVSVNISARQFSDGQL
GTRIANILRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSL
NYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLR
EHGCDEAQGYLFGRPMPATRFEAQFSNDALFMLD
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccagtccagcaaaccgcaggattacagcttgtccaacgtcactccgcccctg
tcccctcgcgcacccgctgtcgtgcccggctcgcccctgcgcgggacattgaagggtgga
ctggccacgctggtgctgctgttgctcggcttgctgttctggcaactgctcgatcaactg
cgcgaaacccaacagcaacagcgccaatacaccatcgattacaccgccgatcttgccgca
caggtcagcctgaacatggccctgaacgcgcaaatcgccctcaacctgctaccgatcgtc
gaacaaccacaaacggccgacgaacagcaggcactggttcgcaaactccagcaatcgttg
cctgaactgcgcagcctggccctgctgagcccttccggtcgagtgctcagtgacagcgac
gccgacagccacgacgccgattacctgggtgaactggtgcagcgcagtcgggcccaggcg
cattatttcagcaatgccgaagacggctccgtggtgcatctattgttgcaccaggccagc
ggtagcagccgtggctactgggccctgcgcctgaccccgaactttttctccaccctgacc
aagcaggccgatacggggatgcgcccattgtggctggtggaaaaccgtctcaaccagcag
atcatcagccgcgacgaaaccctgccctcgagcagccctgcccatctatccccggatgac
ctgaaaaacaccgtactgacagtgcccctgagcagcagcgactggcaactgcgggggctg
ttcgaccgtcgacaggtgatcgagcagctgctgccggccttcatcggcaaatgcctgctg
ggcctggcgttttcgttgttgccggtgattgcgctcttgaacatgcgccggcgccagcgc
cagttgcatgaaggtcggcggcgctaccaggatattttcgaaggcaccggtgtggccctg
tgcgtgctggatctgtcggggctcaaggccttttttgagcgggccggcctgcacaatggc
gatcaattgcgcgcctggacgaaaacctcgcatcaactcgaacagttgcgccaggaagtt
cacgtcaccgaagtcaaccagatggcgttgaaactgcttaacgtcgattcctgcgatcag
gcctggcaactgctggtcggcaagggcgcacaggacaacaaccccgttggctcgaagctg
ctcgaagcgctgctcgaccaaaacaagcaactggaactggaaatcaagctccaggacgcc
catggccgcgaccagcacctgtggctggtgctgcgcctgccggaaaaacagcatgactat
aacgcggtcatcctgagcatcagcgacatcaccagccgcaagctgatcgagctttcgctg
ctcgaacgcgaaggtttctggtccgacgtggtgcgcaccgtgccggatcatctctatgtg
caggacgtcatcagccagcggatgatcttcagcaaccatcacctgggccagaccctgggc
tacgaccgcaccgaactgcaccagatgggcgagtacttctgggaaatcctgctgcacagc
gacgacgccgatcactaccacaacctgcgccaggaacaacgccggggcgggtacacgcaa
ctgttgcaatgccaattgcgctttcgccatcgcaacggcaaatggcgctgcttcgacatt
cgcgaacaggccctggcccgagaccggcataaccaggtgacacgaatcatcggcgtggcc
aaggacgttaccgagcagatcgaggccagcgaatcgctgcgtgacagcgaacagcgctac
cggatgctcgccgaaagcatcagcgacgtgattttctccaccgacaacaagctttcgctc
aactatgtcagcccgtcggtgcaagcggtactgggctacaccgccgactggattttccag
aacggctggcaatcgatcatcgccaacccgcaacaactgaccggcatctacagcctgatg
gaccgggtcagcaaggccctcgacaagcccgaccaactggccgagctgcgcaaccagatg
cagacccagttgttcctgttcgactgcctgcgtgccgacgggcgcaagattcccatcgag
ctgcgactggtgctggtgtgggatgaacacggtgcattcgaaggcgtgctcggcgtcggc
cgcgacatcagccagcagcgtcgcgccgaaaaagacctgcgcatggccgctacggtcttc
gagcactcgacctcggcgatcctgatcaccgacccggccggctacattgtccaggccaac
gaagccttcagtcgcgtcagcggttatgccgtgtcgcaagtgctggaccagttgcccaac
atgctgaccgtggacgagcaacaggaggcacacctgcgctacgtgctcaagcagttgcaa
caacacagcacctgggaaggcgaagtctggctcaagcgccgcaatggcgagcactacccg
gcctgggtcggcatcaccgccgtgctggatgacgaaggcgacctggccagctatgtgtgc
ttcttcagcgacatcagcgaacgcaaggccagcgagcagcgcattcatcgcctggcctat
tacgacgccttgactcacctgcccaaccgcacgctgttccaggatcgcctgcacaccgcg
ctgcaatcggccgataggcagaagacctgggtcgtgctgatgttcctcgacctggaccgc
ttcaagccgatcaacgactccctgggccatgccgccggcgaccggatgctcaaggaaatg
gccacgcgcctgctcggctgcgtcgccgacgacgacaccgtggcgcgcatgggcggcgac
gaattcaccctgctgctgcaaccacgcgccagccgcgagatggcgttgaaccgggccatt
accgtggccgagcagatcctcgccagcctggtccggccattcgtgctcgaaggccgggag
ttcttcgtcaccgccagtatcggtatcgccctgagtccccaggacggcaacgaactgagc
caattgatgaagaacgccgacacggccatgtatcacgccaaggagcgcggcaagaacaac
ttccagttctaccaggccgacatgaacgccagcgccctggagcgcctggaactggaaagc
gacctgcgccacgccctggaacagaacgagttcgtgctgtattaccagccgcagttcagc
ggcgatggcaaacgtttgaccggcgccgaggccctgctgcgctggcgccatccgcgacgc
gggttggtgccgccgggggacttcattccggtactcgaagaactcggtttagtggtagac
gtcggcgactgggtcatcgccgaagcctgtcggcagctcaggacatggcaccaggccaag
gtccgggtgccgaaggtctcggtcaacatttcggcccggcagttctccgacggccagttg
ggcacgcgcatcgccaatatcctgcgcagcaccggcctgccgccagcctgcctggagctg
gaactgacggaaagtatcctgatgcgcgaagtcagcgaggcgatgcagatcctggccggg
ctgaaaaacctcggcctgagcatcgccgtcgatgacttcggcaccggttattcgtcgctc
aactacctcaagcaattccccatcgacgtgttgaagatcgaccgcaccttcgtcgacggc
ctgccgtccggcgagcaggatgcgcagatcgcccgggcgatcatcgccatggcacacagc
ctcaacctggcggtgatcgccgagggtgtcgagacccacgagcaactggacttcttgcgc
gaacacggttgcgacgaagcccagggctacctgttcggccgcccgatgccggccacccgg
tttgaagcgcagttcagcaatgatgcgttgttcatgctcgactga
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