Pseudomonas ogarae F113: PSF113_5116
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Entry
PSF113_5116 CDS
T01734
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfe03000
]
PSF113_5116
03036 Chromosome and associated proteins [BR:
pfe03036
]
PSF113_5116
Transcription factors [BR:
pfe03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PSF113_5116
Chromosome and associated proteins [BR:
pfe03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PSF113_5116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR
HTH_20
TrmB
MarR_2
NirdL-like_HTH
HTH_Mga
DUF501
HTH_5
HTH_28
DUF7343
Fe_dep_repress
HTH_34
LexA_DNA_bind
HTH_Cmi2_C
HTH_IclR
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AEV65095
LinkDB
All DBs
Position
5930008..5930460
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AA seq
150 aa
AA seq
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MDKYDRMLLSALLDNGRASYAELARKVNLSAPAVAERVSKLEASGVITGYQAKVDMAKIG
LPVQCVIELRMNQHGNQKTYDELCKIPQLTECHRVTGDPCVIMQAAVGSMPELEELINRI
AKFGFSKTSIVLSSAIEKRVPLGQLEGNGK
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
gtggataaatacgaccgcatgctgctcagcgctttgttggacaacggtcgggcgtcctac
gctgaactggcccgcaaagtgaacctgtcagcccccgccgtggccgaacgggtcagcaaa
ctggaagccagcggcgtcatcaccggttaccaagcaaaagtcgacatggcaaagatcggt
ctgccggtgcagtgcgtcatcgaactgcgaatgaaccagcacggcaaccagaagacctac
gacgaactgtgcaagatcccacaactgaccgagtgccatcgggtcaccggcgacccgtgc
gtgatcatgcaagcggcggtcggttcgatgcccgagctggaagagctgatcaaccgcatc
gccaaatttggtttcagcaagacctcgatcgtgctgtccagcgccattgaaaagcgcgtg
ccgttggggcaactggaaggcaacgggaagtaa
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