Pseudomonas ogarae F113: PSF113_5117
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Entry
PSF113_5117 CDS
T01734
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03030
DNA replication
pfe03430
Mismatch repair
pfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSF113_5117
03430 Mismatch repair
PSF113_5117
03440 Homologous recombination
PSF113_5117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfe03032
]
PSF113_5117
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_5117
Enzymes [BR:
pfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSF113_5117
DNA replication proteins [BR:
pfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSF113_5117
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSF113_5117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AEV65096
UniProt:
A0ABN5GCF7
LinkDB
All DBs
Position
complement(5930581..5931192)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSSCRATEIAVVMLEQGRIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPSAEKVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLNTFAGLPHTGQAHRAMADAEMAANLTAHLASQLRQKHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgcagtcatcgactttgaaaccaccgggatcaccccgagcagcagttgc
cgggccactgaaatcgcggtggtgatgctcgaacaaggccggatcgtcgaccgctaccag
agcctgatgaatgccggtgtacgggtgccggccttcatcgaacaactgaccggtatcagc
aacgccatgctgcgcagcgccccgtcggcggaaaaagtgatgaacgaggtcaacgagttc
gtcggcatcacgcccctgctggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactggggcgaatcaagcgtactcgcttgcagaattttgcctgttcactgttgctggcc
cggcgcctgatgccagctgcaccgaaccacaagctcggcacgctcaacacgtttgctggc
ttgccccacaccggccaggctcaccgggccatggccgacgccgaaatggccgccaacctc
accgcgcacctggcttcgcagctgcgacaaaagcatgggctgcgggagttgtcccatgat
ttgctgtgcagtttgcagaaggtgccggcggcgaagatcaatgagcacctcaagcggcat
cgcgggttctga
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