Pseudomonas ogarae F113: PSF113_5226
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Entry
PSF113_5226 CDS
T01734
Symbol
xseB
Name
(GenBank) XseB
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSF113_5226 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_5226 (xseB)
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSF113_5226 (xseB)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSF113_5226 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AEV65206
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All DBs
Position
6065675..6065917
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AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQAALAQAEQKVQ
LLLERDGELTEEPFDAEQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagctgcactggatttcgaacaatctctggccgacctgcaaacgctg
gtcgaacgactggagaacggcgaattgtcgctggaagactcgctgaccgccttcgagcaa
ggtatcggcttgactcgcgactgccaggcggcgttggcccaggccgagcagaaggtgcaa
ttgctgctcgagcgtgacggtgagctgaccgaagaacctttcgacgcggaacagcctgaa
tga
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