Pseudomonas ogarae F113: PSF113_5346
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Entry
PSF113_5346 CDS
T01734
Symbol
potD2
Name
(GenBank) PotD
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSF113_5346 (potD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfe02000
]
PSF113_5346 (potD2)
Transporters [BR:
pfe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSF113_5346 (potD2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AEV65318
UniProt:
A0ABM6R6J5
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All DBs
Position
complement(6179635..6180678)
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AA seq
347 aa
AA seq
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MLRSLKFTALTLGMMGAASAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGNGKIVAGE
YNGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQLDPALFGKAEDYVKGAIQPC
GVGFFVWSTVLAYNADKLKTAPTSWADFWDTKQFPGKRGLRKGAKYTLEFALMADGVAPK
DVYKVLAGKDGQDRAFKKLDELKPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKE
SNLKVVWNGGIYDFDAWAIPRGLDKTRAEAAKKFIAFSVAPQQQKTYSENIAYGPANTQA
VPLLAKDVLTNMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatccctgaagttcacagccctgacactgggcatgatgggtgcggcaagcgcg
atggcggcgggcccggacctgaccgtggtgtctttcggcggggcgaacaaggcggctcag
gtcaaagccttctacgcaccgtgggaagcggccggcaacggcaagatcgtggctggcgag
tacaacggcgaaatggccaaggtcaaggccatggtcgataccaagagcgtttcctgggat
ttggtagaggtcgaatccccggagttgtcccgtggttgtgacgaagacatgttcgaacaa
ctcgatccggccctgttcggcaaggccgaagactacgtcaagggtgctatccagccttgc
ggcgtgggcttcttcgtgtggtcgaccgtgctggcctacaacgccgacaagctgaagacc
gcgccgaccagttgggcggacttctgggacaccaagcaattcccaggcaagcgcggcctg
cgcaaaggcgccaagtacaccctggaattcgccctgatggccgatggcgtagcgccgaaa
gacgtctacaaagtgctggctggcaaagacggccaggaccgtgcgttcaagaaactcgat
gagctcaagccgaacatccagtggtgggaagcaggcgcccagccgccgcagtatctggct
tccggtgacgtggtcatgagctcggcctacaacggccggatcgccgcggtgcagaaagaa
agcaacttgaaggttgtgtggaacggcggcatctacgacttcgacgcttgggccatccca
cgcggcctggacaagacccgcgccgaagctgcgaagaaattcatcgctttctcggtggcg
ccgcagcagcagaagacctactcggaaaacatcgcctacggcccggccaacactcaggca
gtaccgttgctggccaaggatgtcctgaccaacatgccgaccaccccggaaaacatcgcc
aaccaggtgcagatcgacgtcagcttctgggctgacaacggtgagcaattggaacagcgc
ttcaactcctgggctgccaagtaa
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