Pseudomonas ogarae F113: PSF113_5435
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Entry
PSF113_5435 CDS
T01734
Symbol
glyA1
Name
(GenBank) GlyA1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00260
Glycine, serine and threonine metabolism
pfe00460
Cyanoamino acid metabolism
pfe00630
Glyoxylate and dicarboxylate metabolism
pfe00670
One carbon pool by folate
pfe00680
Methane metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01120
Microbial metabolism in diverse environments
pfe01200
Carbon metabolism
pfe01230
Biosynthesis of amino acids
pfe01240
Biosynthesis of cofactors
pfe04981
Folate transport and metabolism
Module
pfe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSF113_5435 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
PSF113_5435 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSF113_5435 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSF113_5435 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSF113_5435 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSF113_5435 (glyA1)
Enzymes [BR:
pfe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSF113_5435 (glyA1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEV65407
LinkDB
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Position
complement(6286551..6287804)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTTTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAAEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccaaatccaaggctacgatgatgcactgctggcggcgatgaac
gccgaagagcaacgccaggaagatcacatcgagctgatcgcgtcagagaactacaccagc
aagcgcgtgatggaggcccagggcagcggcctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaagtcgaagccctggccatcgag
cgcgccaagcaattgttcggtgccgattacgccaacgtccagccgcattccgggtcttcg
gccaacagcgccgtgtacctggccctgctgcaggccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtgtcgtcctcgggcaagctctac
aacgcggtgcaatacggcatcgacaccaccaccggcctgatcgactacgacgaagtcgag
cgcctggcggtcgagcacaagccgaagatgatcgttgccggtttctccgcttactccaag
accctggacttccctcgtttccgccagatcgccgacaaggtcggtgccctgttgttcgtc
gacatggcccacgttgccggtctggtcgccgccggtctgtaccctaatccactgccttac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcttgatc
ctggccaaggccaacgaagagatcgagaaaaagctcaacgccgcggtattccccggcgcc
cagggcggcccgttgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcggcg
gaacctggcttcaaggcttaccagcagcaagtgatcgataacgcccaggccatggctggc
gtgttcatcaagcgcggctacgatgtagtgtccggtggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaggatgccgatgctgccctgggccgcgcc
cacatcaccgtcaacaagaacgccgtgccgaacgacccgcaatcgccgttcgtgacctcg
ggcctgcgcatcggtaccccggcggtgaccacccgtggcttcaaggtgacccagtgcgtt
acgctggccggctggatctgcgacattctcgacaacctcggcgatgccgatgtcgaggcc
aatgtcgcgcagcaagtggcggccctgtgcgcggacttcccggtttatcgctga
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