Pseudomonas ogarae F113: PSF113_5453
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Entry
PSF113_5453 CDS
T01734
Symbol
cdhR
Name
(GenBank) CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfe03000
]
PSF113_5453 (cdhR)
Transcription factors [BR:
pfe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PSF113_5453 (cdhR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AEV65425
LinkDB
All DBs
Position
complement(6311310..6312269)
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AA seq
319 aa
AA seq
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MSQDFYFLLMPGFSAIGFISAIEPLRVANRFRGELYRWHVLSVDGGPVLASNGMSVNADA
ALEPLKKGATLWVVAGFEPLKFATPALERWLHRLDNESVTLGGIDTGSVVLAEAGLLEGH
RVTLHWEAIEAFKESYPQLSVTQELFEIDRRRITCAGGTASIDLMLDLIGQAHGSELAIQ
VSEQFVLGRIRPRKDHQRMEIANRYGIRNKKLVHVIGEMETHSEPPLSTLALAESINVTR
RQLERLFRLHLNDTPSNFYLRLRLEKARQLLRQTDMSVLEVSIACGFESPSYFTRSYRAR
FERCPREDRRRQGDGRELV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggatttctacttcttgttgatgccgggtttttcggccatcggtttcatttcg
gccatcgagcccttgcgggtcgccaatcggtttcgtggcgagctgtaccgctggcatgtg
ctgagtgtcgatggcgggccggtgctggcgagcaatggcatgtcggtcaacgccgatgcc
gcactggaaccgctgaagaagggcgcgaccctctgggtggtggccgggttcgaaccgctg
aaattcgccaccccggcactggaacgctggctgcatcggctggataacgaaagcgtgacc
ctgggcggcatcgacaccggcagtgtggtgctggccgaagcggggctgttggaagggcac
cgtgtgactttgcattgggaagcgatcgaggcgttcaaggagtcctatccgcaactcagc
gtgacccaggaactgtttgaaatcgaccgtcgccgcatcacctgtgcgggcggcacggct
tccatcgacctgatgctggacctgatcggccaggcccacggttcggaactggcgatccag
gtcagcgagcagttcgtgctcggccgcatccgcccgcgcaaagaccaccagcgcatggaa
atcgccaaccgctacggcattcgcaacaagaagctggtgcacgtcatcggcgagatggaa
acccacagcgaaccgcccctgagcaccttggcgctggccgagtcgatcaacgtcacccgc
cgccagctcgaacggctgttccgcctgcacctgaacgacaccccgagcaacttctacctg
cgcctgcgcctggaaaaggcccggcagttgctgcgtcagaccgacatgagtgtgctggaa
gtgagcatcgcctgcggctttgagtcaccgtcgtacttcacccgcagctatcgggcacgg
ttcgagcgctgcccgcgggaggatcggcgacggcagggggatgggcgggagttggtttga
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