Pseudomonas ogarae F113: PSF113_5573
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Entry
PSF113_5573 CDS
T01734
Symbol
rlmI
Name
(GenBank) RlmI
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfe03009
]
PSF113_5573 (rlmI)
Enzymes [BR:
pfe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
PSF113_5573 (rlmI)
Ribosome biogenesis [BR:
pfe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSF113_5573 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
TRM5-TYW2_MTfase
FtsJ
UPF0020
PrmA
Methyltr_RsmB-F
Methyltransf_24
Spermine_synth
TRM
Motif
Other DBs
NCBI-ProteinID:
AEV65545
LinkDB
All DBs
Position
6439785..6440981
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRAGHLWVYSNEIDVAATPLHGFKAGDQAILEAAGGKPLGIVAMS
PNNLICARLLSRDVKLPLDKSLLVHRLNVALSLRERLFDKPFYRLVYGDSDLLPGLVVDR
FGDILVVQIASATMEAHKDDVIAALTQVLKPSGILFKNDSAARDAEGLNRYVETVFGLVP
EWVALEENGVKFEAPVMEGQKTGWFYDHRMNRARLAPYAKGKRVLDLFSYIGGWGVQAAA
FGASEVFCVDASAFALDGVERNAALNGFAEKLTCIEGDVFEALKELKASEERFDVIVADP
PAFIKRKKDLKNGEGAYRRLNEQAMRLLSKDGILVSASCSMHLPEDDLQNILLTSARHLD
RNIQLLERGGQGPDHPVHPAIAETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcctagcctgcgcctcaaagccaacgccgaccgtcgcctgcgcgccggccac
ctgtgggtctacagtaacgaaatcgatgtagccgccaccccgctgcacggcttcaaggcc
ggcgaccaggccatcctcgaagctgccggcggcaagccgttgggcatcgttgcgatgagc
cccaacaacctgatctgcgcccgactgctgtcccgtgacgtgaagctgccgctggacaag
tccctgctggtgcatcgcctcaacgtggcgttgtccctgcgcgagcggctgttcgacaag
ccgttctatcgcctggtctacggtgactccgacctgttgccaggtctggtagtcgaccgt
ttcggcgacatcctggtggtgcagatcgcctcggccaccatggaagcccacaaggacgac
gtgatcgccgccctgacccaggtgctcaagcccagcggcatcctgttcaagaacgactcc
gcggcccgtgacgccgaaggcctgaatcgctacgtcgagaccgtgttcggcctggtgccg
gaatgggtcgccctggaagagaacggcgtgaagttcgaagcgccggtcatggaaggccag
aaaaccggctggttctacgaccaccgcatgaaccgcgcacgcctggccccgtacgccaag
ggcaagcgcgtcctggacctgttcagctacatcggcggctggggcgtgcaagcggcggcg
ttcggcgccagtgaagtgttctgcgtcgatgcctcggcctttgccctcgacggtgtcgag
cgcaacgccgcgttgaacggcttcgccgagaagctgacctgcatcgagggcgacgtgttc
gaggccctgaaggaactcaaggccagcgaagagcgtttcgacgtgatcgtggccgacccg
cccgctttcatcaagcgcaagaaagacctgaaaaacggtgaaggcgcctatcgtcgcctc
aacgaacaagccatgcgcctgctcagcaaggacggcatcctggtcagcgcgtcgtgctcg
atgcacctgcccgaagacgatctgcaaaacatcctgctgaccagcgcccgtcatctggac
cgcaacatccaactgctcgagcgcggcggccaggggccagaccatccggtacacccggcc
attgccgaaacccgctacatcaagagcatcacctgccggttgttgcccaacagctga
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