Pseudomonas ogarae F113: PSF113_5676
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Entry
PSF113_5676 CDS
T01734
Symbol
ubiD
Name
(GenBank) UbiD
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00130
Ubiquinone and other terpenoid-quinone biosynthesis
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01240
Biosynthesis of cofactors
Module
pfe_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
pfe_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PSF113_5676 (ubiD)
Enzymes [BR:
pfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
PSF113_5676 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AEV65648
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All DBs
Position
complement(6547357..6548823)
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AA seq
488 aa
AA seq
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MQYRDLRDFISGLEQRGELKRIQVPVSPVLEMTEVCDRTLRAKGPALLFENPTGYDIPVL
GNLFGTPERVALGMGAEAVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKIIAMAPK
VVKDAICQEVVIEGDDVDLAMLPVQTCWPGDVGPLITWGLTVTKGPNKDRQNLGIYRQQV
IGRNKVIMRWLSHRGGALDYREWCEKHPGQPFPVSVALGADPATILGAVTPVPDSLSEYA
FAGLLRGNRTELVKCRGNDLQVPATAEIILEGVIHPGEMADEGPYGDHTGYYNEVDSFPV
FTVERITHRIKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY
RMAVVTMKKSYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
KRDTVMIENTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDEAVTQRIDA
IWNQLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgcgacttgcgcgactttatcagcgggctggaacagcgcggcgaactcaag
cgcatccaggtgccggtgtcccccgtcctggaaatgaccgaggtctgcgaccgcaccctg
cgcgcaaaaggcccggcactgttgttcgaaaacccgacaggttatgacattccggtgctg
ggcaacctgttcggcacgccggagcgcgtggccctgggcatgggcgccgaagccgtcagc
gaactgcgcgaaatcggcaagctgctggcgttcctcaaggaacccgagccgccgaaaggc
ctgaaggatgcttggtccaagctgccgattttccgcaagatcattgccatggcgccgaag
gtcgtcaaggacgcgatctgccaggaagtagtgatcgaaggcgacgatgtcgacctggcc
atgcttccggtgcagacctgctggccgggcgatgtggggccgctgatcacctggggcctg
accgtcaccaagggcccgaacaaggatcgccagaacctgggtatctaccgtcagcaggtg
attggccgcaacaaagtcatcatgcgctggctgagccatcgcggcggtgcactggactac
cgtgagtggtgtgaaaaacaccccggccagccattcccggtgtcggtggccctgggcgcg
gacccggcgaccatcctcggtgccgtcacgcctgtacccgacagcctctccgaatatgcg
ttcgccggcctgttgcggggcaaccgcaccgagctggtgaaatgccgcggcaacgacctg
caagtaccggccaccgccgagatcatccttgaaggggtgatccatcctggcgaaatggcc
gatgaaggtccgtacggcgaccacaccggctactacaacgaagtcgacagcttcccggtg
ttcaccgtcgagcgcatcacccatcggatcaagccgatttaccacagcacctataccggc
cgtccgcccgatgagccggccattctcggcgtggcgctgaacgaagtgttcgtgcctatc
ctgcaaaagcagttcccggaaatcaccgatttctatttgccgccggaaggctgttcgtat
cgcatggccgtggtgaccatgaagaagtcgtatccggggcatgccaagcgggtgatgctc
ggtgtctggtcgtttttgcgacagttcatgtacaccaagttcgttatcgtcaccgacgac
gatatcaacgcacgggactggaacgatgtgatctgggccatcaccacgcgcatggacccc
aagcgcgacacggtgatgatcgagaatacaccgatcgactacctcgacttcgcctcgccg
gtgtctggcctggggtcgaagatggggctcgatgccacgcataaatggcccggtgaaacc
acccgtgagtggggccgggttatcgtcaaggatgaagccgttacccaacggatcgatgcc
atctggaatcagttaggaatagattga
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