Pseudomonas ogarae F113: PSF113_5806
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Entry
PSF113_5806 CDS
T01734
Symbol
clpB3
Name
(GenBank) ClpB
KO
K11907
type VI secretion system protein VasG
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe02025
Biofilm formation - Pseudomonas aeruginosa
pfe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSF113_5806 (clpB3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSF113_5806 (clpB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfe02044
]
PSF113_5806 (clpB3)
Secretion system [BR:
pfe02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSF113_5806 (clpB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Zeta_toxin
Sigma54_activat
AAA_25
TniB
nSTAND3
AAA_7
ATPase_2
AAA_14
NACHT
AAA_18
Torsin
Hpr_kinase_C
HH_AprE
CbiA
SRP54
Motif
Other DBs
NCBI-ProteinID:
AEV65780
UniProt:
A0ABM6R934
LinkDB
All DBs
Position
6689223..6691913
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AA seq
896 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPENALTASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGSRQTQSETL
LSAERERLAELEGRWAEEKTLVDELLATRATLRERVGVVDSEDNSEASDNESHQLREKLV
DLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRII
GQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVIT
INMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF
QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLE
IFPPALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRC
TETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISAVDNELQYDFSDAA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcgttgttcggcaaactcaacagcgtggcctacaaagcc
attgaagccgccaccgtgttctgcaaattgcgcggtaacccttatgtggaactggcccac
tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcattcgccagttc
aacatcgagccggcgcgcctggcccgcgacctgaccgaagccctggaccgcctgccacgg
ggttcgacgtcgatcaccgacctgtcgtcccacgtggaagaagccgtggaacgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggttacctggtgctgggc
attctcaagaccccgagcctgcgccacgcgctgctgggcctgtcgtcggagttcgacaag
gtcaaggtcgaagccctgagcgaacggtttgacgaatacgtcggcgactcgccggaaaac
gccctgactgccagcgacggcttcaatgccggtgccgtgccgggcgaagccagcggcgcc
atggcccctagcgccatgggcaaacaggaagccctcaagcgctttaccgtcgaccttacc
gagcaggcccgcagcggcaagctcgacccaatcgtcggccgtgacgaagagatccgccaa
ctggtggacatcctcatgcgccgccggcagaacaacccgatccttaccggtgaagccggc
gtgggcaagaccgccgtggtcgaaggcttcgccctgcgcatcgtcgccggcgacgtacca
ccggccctcaaggacgtggaactgcgcagcctcgacgttggcctgttgcaggccggcgcg
agcatgaaaggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtgggtgccggcggcgcc
gccggcacgggcgacgcggccaacctgctcaagccggcgttggcccgcggcaccttgcgc
accgtggccgccacgacctgggccgagtacaagaagcacatcgaaaaagacccggccctg
acccgccgtttccaagtggtgcaagtggccgagccgtcggaagacaaggccctgctgatg
atgcgcggcgtggcctcgaccatggaaaaacaccaccaggtgcagatcctcgacgaagcc
ctggaagcctcggtcaagctgtcccaccgctacattcccgcgcgccagctgccggacaaa
tccgtgagcctgctggacaccgcttgcgcccgcgtcgccatcagcctgcacgccgtaccg
gccgaagtggacgacagccgtcggcgcatcgaagcgctggaaaccgagctgcaaatcatc
gcccgtgaacacgcgattggcgtggtcatcggcagccgccagacccagagcgaaaccctg
ctgagcgccgagcgcgaacgcctggccgagctggaaggccgctgggccgaagagaaaacc
ctggtggacgaactgctcgccacccgcgccaccctgcgcgagcgcgttggcgtggtggac
agcgaggacaacagcgaagcttctgacaacgaaagccaccaactgcgtgagaaactggtg
gacctgcaacagcgcctgacggccctgcaaggcgaaactccgctgatcctgccgaccgtg
gattaccaggccgtggcctcggtggtcgccgactggaccggtatcccggtgggccgcatg
gcccgcaacgaactggaaaccgtgctcaacctcgaccagcacctgaagaaacgcatcatc
ggccaggaccatgccttgcagatgatcgccaagcgcatccagacctcccgcgccggcctc
gacaacccgagcaagccgattggtgtgttcatgcttgccggcacttccggcgtgggcaag
accgaaaccgccctggccctggccgaagccatgtacggcggcgagcagaacgttatcacc
atcaacatgagcgagttccaggaagcccacaccgtgtcgaccctcaagggcgcgccaccg
ggctacatcggctatggcgaaggcggcgtgctgaccgaggccgtgcggcgcaaaccgtac
agcgtggtgttgctggacgaggtggaaaaggcccacccggacgtgcatgagatcttcttc
caggtgttcgacaaaggcgtgatggaggacggcgaaggccgggtgatcgacttcaagaac
accttgatcctgctgaccaccaacgccggcaccgagttgatcgcccaggtctgcaaagac
ccgcagaacgtgcccgagccggaagaaatcgccaaggccctgcgccaaccgctgctggag
attttcccgccggccttgctgggccgcctggtgacgatcccgtactacccgctcagcgac
gagatgctcaaggccatcacccgcctgcaactcaaccgcatcaagaagcgcgtggaaagc
acccacaaagtcgccttcgactacgacgacgcggtgatcgatttgatcgtctcgcgttgc
accgaaaccgaaagcggcgggcgcatgatcgacaccatcctgaccaacagcctgctgccg
gacatgagccgcgagttcctgacccgcatgctcgaaggcaaggctttggccggggtgcgg
atcagcgccgtggataacgaattgcagtacgatttcagcgacgcggcctga
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