Pseudomonas ogarae F113: PSF113_5819
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Entry
PSF113_5819 CDS
T01734
Symbol
impJ3
Name
(GenBank) ImpJ
KO
K11893
type VI secretion system protein ImpJ
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSF113_5819 (impJ3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfe02044
]
PSF113_5819 (impJ3)
Secretion system [BR:
pfe02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSF113_5819 (impJ3)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AEV65793
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Position
complement(6713149..6714480)
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AA seq
443 aa
AA seq
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MNHDKVVWQEGMLLRPQHLQHNDRYFDHQLKVRTRLLASYAWGFLALEIDLQFLNMGQLV
VSQASGVLPDGSLFELGGNTEPLALEVPSNTSNTPIYLALPLVTGNHIESRRPEQSDVLA
RYTIYDAQVTDSNAGDSGGSQISCGRPDLRLLLGEQQSDHAFVKLKLCEVLDTTADGLIR
LDPDFVPTFIQARSSHYLLSCLKEIIGMLAHRGDSLAERIRFNGKAGGAQVGDFMMLQLI
NRSELLLRHYLDLEQVHPETLYRMLLALLGELATFSSDSKRPPLTNRYQHSDQGACFRSL
MQAIRQVLSMVLEQHAIELQLQPRQYGITVSPMQDLTLLDTASFVLAASANCDSEELRHR
LPSNLKVGSVERIRQLVNLHLPGIKIRPLPVAPRQIAFHANKTYFILEPSSEDLAQLKRS
AGFAFHVCGDFAELELNFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgataaagtcgtctggcaagaaggcatgttgttgcgtccacaacatttgcaa
cacaacgatcgttatttcgatcaccagttgaaggttcgtacccggttgctggccagttac
gcctggggattcctggcgctggaaatcgatctgcaatttctcaacatgggccaactggtg
gtcagccaggccagcggggtcctgccggacggcagcctgttcgagctcggtggcaacacc
gagccgttggccctggaagtaccgtccaataccagcaatacaccgatctacctcgcgctg
ccattggtgaccggcaaccacatcgagtcccgtcgtccggagcaatctgatgtgctggcg
cgctacaccatctacgacgcgcaggtgaccgactccaacgccggcgattccggcgggagc
cagatcagttgtggccggccggacctgcgcctgctgttgggcgagcaacagagcgaccat
gcgtttgtgaagctcaagctctgtgaggtgctcgataccactgctgatgggctgatcagg
ctcgacccggactttgtgccaaccttcatccaggctcgttcatcccattatttgctgtcg
tgtctcaaggagatcatcggcatgcttgcccatcggggtgacagccttgccgagcggatc
cgcttcaatggcaaggccggtggtgcgcaagtgggcgatttcatgatgctgcaactaatc
aatcgtagcgaactgttgctacgtcattatctggatctggagcaagtacatcccgaaaca
ctctaccgaatgctactggccctgttgggtgaactggcgacgttctccagtgacagcaag
cgtccaccgctcaccaaccgctaccagcacagcgaccagggcgcatgttttcgaagcctg
atgcaggcgatccgccaggtgctgtcgatggtgctcgagcagcacgctatcgagctgcaa
ttgcagccgcgccaatatggaatcaccgtctcgccgatgcaggacctcaccctgctggat
acggcttcattcgtactggcggctagcgccaactgtgacagcgaagagttgcgccatcga
ctgccgtcgaacctcaaggttggctcggtggagcgcatccgccagttggtcaacctgcat
ctgcccggtatcaagatcaggcctctgcccgtggctccgcggcagatcgcattccatgcc
aacaaaacctatttcatcctggagcccagctccgaagacctggcgcaactgaagcgctcg
gcaggcttcgcgttccatgtgtgcggtgatttcgcggagcttgaactgaatttttgggcc
atcaggaattga
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