KEGG   Pseudomonas ogarae F113: PSF113_5822
Entry
PSF113_5822       CDS       T01734                                 
Symbol
sfa2
Name
(GenBank) Sfa2
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pfe  Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfe03000]
    PSF113_5822 (sfa2)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfe02044]
    PSF113_5822 (sfa2)
Transcription factors [BR:pfe03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PSF113_5822 (sfa2)
Secretion system [BR:pfe02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PSF113_5822 (sfa2)
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_2 AAA_16 AAA_7 HTH_50 wHTH-HSP90_Na-assoc
Other DBs
NCBI-ProteinID: AEV65796
UniProt: A0ABM6R7U7
LinkDB
Position
complement(6716055..6717572)
AA seq 505 aa
MFKKLSQPLDYAEALLAQFSDLSRLADGAELVGKFIQGVARLSGCELVQLYLLDATRTRL
EMNTECLEGQLQFRDPKSLPSDYHSEQLLQFSLCQNRVVCLDALSDSVHETGFLPPRARP
WQSLLCVPLGDPQDGVAGLLLCASNQHLDLHGIAESLGHLGTFALGQMHLLQRLRGPVDE
SEPDTTSLPSAVSYGLIGKSMAMRKTCSLLSKVLHSPYTVLLRGETGTGKEVVARVLHDY
GPRRSKAFIVQNCAAVPENLLESELFGYRKGAFTGADRDRAGLFDAANGGTLLLDEIGDM
PLSLQAKLLRVLQEGEIRPLGSNVTHHVDVRIIAATHRDLKQLMEEGKFREDLYYRLAQF
PIPLPALRQRDGDIIELARHFADKACTLLQRDPVRWSDAALDHLAAYDFPGNVRELKSIV
ERAVLLCEGGELLVEHFALHIQTPAERGRVSLRERMEQIERGLLIDGLRESSGNKARAAR
ELGLPLRTLVYRLARLNVQRSDFKD
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgttcaagaaactctcgcaaccgttggactatgccgaagcgcttctggcgcagttttcc
gacctttcacgtttggcggacggtgctgagctggtggggaagttcatccagggcgtagcg
cggctcagtggctgtgaactggtgcagttgtacctgctcgatgccactcgcacccgcctg
gaaatgaacaccgagtgcctggaagggcagttgcaatttcgtgacccgaaaagcctgccc
tccgactaccactccgagcaattgttgcaattttccctgtgccagaaccgtgtggtgtgc
ctcgacgcgttaagcgacagcgtgcacgaaaccggtttcctgccgccgcgggccagaccc
tggcagtcgctgctttgcgttcccctgggcgatccgcaggatggggtcgcaggcttgttg
ctatgcgcgagcaatcagcacctcgacctgcatggtatcgctgagtccctggggcatctt
gggaccttcgcgcttggtcagatgcatctgttacagcgcctgcgcggtcctgttgatgag
tcagagcctgataccacaagcctgccgagcgccgtcagttacggcctgattggcaagagc
atggccatgcgcaagacctgctcattgctcagtaaagtactgcacagcccctataccgtc
ctgctgcggggtgagaccggtaccggcaaggaggtggtggcccgggtcctccatgattac
ggcccgcgtcgatccaaggcgtttatcgtgcagaactgtgcggcggttcccgagaacttg
ttggagagtgagcttttcggctatcgcaagggcgcgttcaccggtgccgaccgggaccgg
gccgggctgttcgacgcggccaacggcggcacgctgttgctcgatgaaatcggcgatatg
ccgttatccctgcaggccaagttgttgcgagtgttgcaggaaggcgaaatccggccgttg
gggtccaacgtcactcaccatgtcgacgtgcgcatcatagccgccacccaccgcgacctg
aagcaactgatggaggagggcaagttccgcgaagacctgtattaccgccttgcgcagttt
ccaattccgctaccggcgttgcgccagcgcgacggcgacatcattgagctggcgcggcat
tttgccgacaaggcttgcacactcctgcagcgtgatccggtgcgctggtcagacgcagcg
ctcgatcacctggctgcctacgacttcccgggaaacgtccgtgaactcaagagcatcgta
gaaagggccgtgctcttgtgcgagggcggcgaactgcttgtcgagcattttgcactacac
atccagaccccagccgagcggggccgtgtgagcttgcgtgaacggatggagcagatcgaa
cgtggcctgctgatcgatggcctgcgcgagagttcgggcaacaaggcgcgtgccgcccgt
gaacttggcttgccgctacgcacgctggtctatcgccttgcgcgcctgaacgttcagcgt
agtgatttcaaagattga

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