KEGG   Pseudomonas ogarae: PSF113_5823
Entry
PSF113_5823       CDS       T01734                                 
Symbol
clpB4
Name
(GenBank) ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
pfe  Pseudomonas ogarae
Pathway
pfe02025  Biofilm formation - Pseudomonas aeruginosa
pfe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSF113_5823 (clpB4)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSF113_5823 (clpB4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfe02044]
    PSF113_5823 (clpB4)
Secretion system [BR:pfe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSF113_5823 (clpB4)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_22 AAA_16 ClpB_D2-small nSTAND3 AAA_7 Clp_N NACHT Sigma54_activat TniB AAA_30 AAA_29 AAA_18 AAA_33 SRP54 Mg_chelatase T2SSE Hpr_kinase_C SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AEV65797
LinkDB
Position
complement(6717583..6720168)
AA seq 861 aa
MINVDLQQLIQALDAETRSDLSRSAEQCVARGADKVLVEDLMLGLLERPQGLLARALQDA
QVSAGELSAALQPRMGHSASRNPVFAPELVQWLQDALLVANLELGCSQVGQAALILALLR
NPLRYAGSAYQALLTRLNVDRLKDFALSQQTHPVADHSAKPDDSLLARFTHDLTRQAREG
QLDPVLCRDGEVRQMIDILVRRRKNNPIVVGEAGVGKTAIVEGLALRIAAAEVPSVLEGV
ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKASPKSIILFIDEAHTLIGAGGNAGGADA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAR
VYENSHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPHSLERL
RGELAEGERQRQALRRDAQAGLSIDLQALEALEVRLEAIEDERRTLEIHWTEQRILAERL
LALRQQLAKVRDGAVDQPLSVEALEAALHETHGTLVAAQVQERLVSFEVCPRLVAEVISA
WTGVPLAQLAREHSLKVASFATDLRARIRGQEPAVRALDRAMRAAAAGLNKPDAPVGVFL
LVGPSGVGKTETAHALADLLYGGDRFITTLNMAEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRQKPYSVVLLDEVEKTDPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS
ERINELCENGTKPSAECLEESIRPILSQHFKPALLARMCVVPYYPLNGPVLRELVEVKLD
HLGERLHRRQLGFSYCGHLVNHLVERCSRNDRGARLIDQLLDLHLMPLVADRLLAAMAGG
EQLRHVHAVLNGDASLACEFS
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgatcaacgtagaccttcagcaactgatccaggcgttggacgccgaaaccagaagcgat
ctgtcgcgctcggccgagcaatgcgtcgcccgtggggcagacaaagtcctggtggaagac
ttgatgctgggcttgctggaacgtccgcaggggctgctcgcgcgagccttgcaagatgcc
caggtaagcgcaggtgaactgagcgctgcgctgcaaccacggatggggcacagcgcttcg
cgcaatccggtattcgccccggagctggtgcaatggttgcaggatgcactgctggtagcc
aatctcgagctgggctgcagccaggtcggacaagccgcgttgatcctggcgttgctgcgc
aacccgcttcgctatgcagggagtgcttaccaggcgctgctcacccgactgaacgtcgat
cggttgaaagatttcgccttgtcgcaacagacccacccggtagccgatcactccgccaag
ccggacgactccctgctggcgcgcttcacccatgacctgacccggcaggctcgtgaaggt
caactcgacccggtgctttgtcgcgacggtgaagtcaggcagatgatcgatatcctcgtt
cgtcgccgcaaaaataacccaatcgtggtcggtgaagcaggggtgggcaagaccgccatc
gtcgaggggctggcgttgcgcatcgccgccgcagaagtaccgtcagtgctcgaaggcgtc
gagctgctttcgctggatatggggctcctgcaggccggcgccagcataaaaggtgaattc
gaacgtcgtctcaaaggggtgatcgacgaggtcaaggcttcgccaaaatccatcatcctg
ttcatcgatgaggctcacaccttgattggcgcgggtggcaacgccgggggcgccgatgcg
gccaacctgctcaagccggccttggcccggggtgagctgcgtactatcgcggccaccacc
tgggccgagtacaaaaaatattttgagaaagacccggccctggcccgtcgtttccaaccg
gtgcaattgcacgagccgaccgtcagtgaagcagtgaccatcctgcgcggcctggcccgg
gtctacgagaacagtcacggcatttacctgcgggatgatgcggtggtcgcggcggcgcaa
ttgtcggcccgctacctggctggtcgtcagttgccagacaaggctgtggatgtgttggac
actgcctgcgcccgcgtgcgcatcagcctggccgctgcgccgcatagcctggagcgattg
cgcggcgagttggctgaaggcgagcgccagcgccaggcgctacgtcgtgatgcgcaggcc
ggcctatcaattgatcttcaggcgctggaagcgctggaggtacgcctggaggccatcgaa
gacgagcgccgaacgctggagatccactggaccgagcaacgcattcttgcggagcgcctg
ttggcgcttcgccagcaattggccaaggtacgggacggtgcggtggatcaacccctcagc
gtcgaagccttggaagcggcgttgcatgaaacacacggcacgttggtggctgcgcaagtc
caagagcgcctggtcagcttcgaagtttgcccgcgactggtagccgaagtcatcagtgcc
tggaccggtgtgccgctggcacaactggcgcgggagcacagtttgaaagtcgccagtttc
gcgacggacctgcgtgctcgtattcgtggtcaggagccggctgtgcgggcgcttgatcgc
gcgatgcgtgccgccgccgcaggcctgaacaaacccgacgctccggtgggcgtgtttctg
ttggtagggcccagtggcgtcggcaagaccgagacggcgcatgccctggccgacctgctc
tacggcggtgatcgttttatcaccacgctcaacatggccgaattccaggagaaacatacg
gtttcccggctgattggcgcgccgccgggctacgtcggttttggcgaaggcggcatgctc
accgaagccgtgcggcaaaagccctattcagtggtgctgctcgatgaggtcgaaaaaacc
gacccggatgtgttgaatctgttctaccagatcttcgacaagggcttggccaacgacgga
gaagggcgggagattgattttcgcaacaccctgatcctgatgacgtcgaacctgggcagc
gaacgcatcaacgagttgtgcgaaaacggtacaaaaccaagtgccgaatgccttgaagag
tccattcgcccaatactcagtcaacatttcaaacccgcgctgttggcgcgcatgtgcgtg
gtgccgtactacccgctcaacgggccggtgttacgtgaactggtggaagtcaaactcgac
cacctgggcgagcggctgcaccgtcgtcaattgggtttcagttattgcgggcaccttgtg
aaccacctggtcgagcgttgcagtcgtaatgatcgtggcgcacgactgattgaccaactg
cttgacctgcacctgatgccgctggttgccgaccggttgctcgccgccatggccggtggc
gaacagctacggcacgtacacgccgtgctcaacggcgacgccagtctcgcgtgtgagttc
tcctga

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