Pseudomonas ogarae F113: PSF113_5855
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Entry
PSF113_5855 CDS
T01734
Symbol
uvrD
Name
(GenBank) UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe03420
Nucleotide excision repair
pfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSF113_5855 (uvrD)
03430 Mismatch repair
PSF113_5855 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_5855 (uvrD)
Enzymes [BR:
pfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSF113_5855 (uvrD)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSF113_5855 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSF113_5855 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEV65829
UniProt:
A0ABM6R824
LinkDB
All DBs
Position
6766877..6769060
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSADFPDAEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPTRGI
GEKTVEAIRDHARHSHVSMWEAMHQLVANKGMTGRAAGALKAFMDLIEDLAAKCGEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFESTEEDEDLTPLSAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSTSSLFGGSNIPETGFSLGQTVRHSVFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgtcaggccgta
gccgcctccgtgggtcgtcagttggtcctggccggtgccggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccccattcgatcctg
tcggtgacgttcaccaacaaggccgcggccgagatgcgtcatcgcatcgagcaactgatg
ggcatcaaccccgccggcatgtgggtcggcacgttccacggcctggcgcaccgcttgttg
cgggcgcattggcaggaggccgggctgagccagaccttccagatcctggacagcgacgac
cagcagcgcctggtcaagcgggtgatccgcgagctgggcctggacgagcagcgctggcca
gcccgccaggcgcaatggttcatcaacggccagaaagacgaaggcctgcgtccgcagcac
atccaggccagcggcgacctgttcctggcgaccatgcgcagcatctacgaagcctacgag
gcggcgtgtcagcgtgccggagtcatcgacttctccgagctgctgctacgggcactggac
ctgtggcgcgaccacccaggcctgctggcccattaccagaagcgcttccggcatgtactg
gtggacgaattccaggacaccaacgccgtgcaatacgcctggttgcgcctgctcgccaag
ggcggtgacagcctgatggtggtgggtgacgacgaccagtcgatctacggctggcgcggc
gccaagatcgagaacatccaccaatactcggcggacttcccagacgccgaagtcatccgc
ctggaacagaactaccgctccaccgccggcatcctcaaggccgccaatgccctgatcgcc
aacaacaccgggcgcctgggcaaggaattgtggaccgacggcggcgaaggcgaagcgatc
aacctctacgccgccttcaacgagcacgacgaagcccgctacgtggtggaaaccattgaa
agcgcgctgaaaaccggcctggcccgcagcgatatcgccatcctgtaccgttccaacgcc
cagtcgcgggtgctggaagaggccttgctgcgcgaacggatcccctaccgcatctacggc
ggccagcgcttcttcgagcgtgctgaaatcaagaacgccatggcctacctgcgcctgatc
gaaggacgcggcaacgacgcggccctggaacgggtgatcaacgtgccaacgcggggcatc
ggtgagaaaaccgtcgaggcgattcgcgatcacgcgcgccacagccacgtgtccatgtgg
gaagccatgcaccaactggtcgccaacaaaggcatgaccggtcgcgccgccggtgcgctg
aaggccttcatggacctgatcgaggacctggccgccaagtgcggggagatgccgctgcac
ttgatgacccagaccgtcatcgagcaatccggcctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaagcaccgaagaagacgaagacctgacgccgctgtcggccttcctgggtcacgcc
tccttggaggccggcgacacccaggccgacgagcatgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggaattcccctacgtattcctcgtgggtatggaagagggc
ctgtttccccacaagatgagcctggaagaaccgggacgcctggaagaggaacgacgcctg
gcctatgtcggcatcacccgcgccatgcagaatctggtcatgacctacgccgaaacccgg
cgtttgtatggcagcgagacctacaacaaggtgtcgcgcttcgtgcgtgaagtcccgaag
ggcctgattcaggaagtgcggctgtccaacagtgtcagccgaccgttcggtggcggccag
caacaaagcaccagcagcctgttcggcggcagcaacatcccggaaaccgggttcagcctc
ggccagaccgtgcggcattcggtattcggcgacggcgtgatcctcaacttcgagggtgcc
ggcgcccaggcgcgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctgggg
tatgccaagctggaagcgatctaa
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