Paracoccus ferrooxidans: E3U26_02575
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Entry
E3U26_02575 CDS
T09619
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfeo
Paracoccus ferrooxidans
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfeo03032
]
E3U26_02575
03400 DNA repair and recombination proteins [BR:
pfeo03400
]
E3U26_02575
Enzymes [BR:
pfeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E3U26_02575
DNA replication proteins [BR:
pfeo03032
]
Prokaryotic type
DNA Topoisomerases
E3U26_02575
DNA repair and recombination proteins [BR:
pfeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E3U26_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WGR59673
LinkDB
All DBs
Position
complement(506421..507482)
Genome browser
AA seq
353 aa
AA seq
DB search
MPRDTPAPSDPVAAAKQAGLVHVSDDMPGITRIRAGKGFCYRDPQGRRITDKAERRRLAA
LAVPPAYTDVWICPDPRGHIQATGRDARGRKQYRYHPGFRAFRDSAKYDHMLAFARLLPR
IRACVARDMALRGLPAQKVLATVVHLLETTMIRVGNGDYARRNRSHGLTTLRSRHVRLEG
NQLRFRFRGKGGREWNLGIRDRRVARIVRSMQDLPGQALFQYLDEEGARQKITSTDVNDY
LRRISCSEVTAKDFRTWTGTVLAALALSAYPACDSQAAANRNIREAIETVAGHLGNTPAI
CRKCYVHPRIIEAYLAGELKLGPCRKPAGDPQKPGLRHEERQVLNFLGRRLRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggacacgcccgccccttcggaccccgtcgcggccgcgaaacaggccgggctg
gtgcatgtcagcgacgacatgcccgggatcacccgcatccgcgcgggcaaggggttttgc
tatcgcgatccccagggccggcggatcaccgacaaggccgagcgcaggcggctggcggcg
ctggcggtgccgccggcctataccgacgtctggatctgccccgatccgcgcggccatatc
caggccaccggcagggacgcgcgcgggcgcaagcaataccgctaccaccccggtttccgc
gccttccgcgacagcgccaaatacgatcacatgctggcctttgcccggcttctgcccagg
atccgcgcctgcgtcgcgcgcgacatggcgctgcgcgggctgcctgcgcaaaaggtgctg
gcgacggtggtgcatctgctcgagaccaccatgatccgcgtcggcaacggcgactatgcc
cgccggaacaggtcgcacgggctgaccaccttgcgcagccggcatgtcaggctggagggc
aaccagctgcggttccgctttcgcggcaagggcggcagggaatggaacctgggcatccgc
gaccgccgcgtggcccggatcgtgcgcagcatgcaggatctgcccggccaggccctgttc
cagtatctggacgaggagggcgcccggcagaagatcacctcgaccgacgtgaacgactat
ctgcgccggatctcgtgcagcgaggtgacggccaaggattttcgcacctggaccgggacg
gtcctggccgcgctggccctgtcggcatatcccgcctgcgacagccaggcggcggcgaac
cgcaacatccgcgaggccatcgaaaccgtcgccggccatctgggcaatacgccggcgatc
tgccgcaaatgctatgtccacccccggatcatcgaggcttacctggctggcgaactgaag
ctgggcccctgccgcaaacccgccggcgacccgcaaaagccggggctgcggcacgaggaa
aggcaggtgctgaattttctcggccgccggctgcgcgcctga
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