KEGG   Paracoccus ferrooxidans: E3U26_02775
Entry
E3U26_02775       CDS       T09619                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pfeo  Paracoccus ferrooxidans
Pathway
pfeo00230  Purine metabolism
pfeo00240  Pyrimidine metabolism
pfeo01100  Metabolic pathways
pfeo01232  Nucleotide metabolism
Module
pfeo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pfeo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pfeo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    E3U26_02775
   00240 Pyrimidine metabolism
    E3U26_02775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfeo03400]
    E3U26_02775
Enzymes [BR:pfeo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     E3U26_02775
DNA repair and recombination proteins [BR:pfeo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    E3U26_02775
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N
Other DBs
NCBI-ProteinID: WGR59707
LinkDB
Position
complement(545284..548904)
AA seq 1206 aa
MRIERRFTTVESGAYGALSFTTTSSEIRNPDGTVVFRNDAVEVPQGWSQVASDVIAQKYF
RKAGVPARLKRVKEKGVPEFLWRSVPDEAALAALPEEARFGGESSARQVFDRMAGAWTYW
GWKGGYFSNEEDARAYYDEMRYMLASQMGAPNSPQWFNTGLHWAYGIDGPGQGHFYVDYK
TGKLVRSDSAYEHPQPHACFIQSVADDLVNEGGIMDLWVREARLFKYGSGTGTNFSSLRG
EGEKLSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDMDHPDIEQFINWKVIE
EQKVASLVAGSKMHERELNAIFAAIRAWDGSAEDATDPARNAALKAAIRGAKRVMIPETY
INRVLQYARQGFDSIEFPTYDTDWDSEAYVSVSGQNSNNSVRVTDAFLRAVRDDLPWELV
RRTDGRVTKTVSARELWQQIGHAAWACADPGIQFHDTINAWHTCPEDGPIRASNPCSEYM
FLDDTACNLASMNLLSFWQDGEFDADGYVHACRLWTVTLEISVMMAQFPSREIAQRSYDF
RTLGLGYANIGGLLMNMGLGYDSEQGRALCGALSAIMTGVSYATSAEMAAELGPFPGYGK
NAGHMLRVIRNHRAAAYGTGAYQGVNVAPVELDAANCPDPRLVALAQGAWDEALTLGEEH
GYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAALEALG
YGSAQIEEIIAYAVGHASLGNCPGINHASLVGHGFGPRELEKIDAALASAFDIRFVFNQW
TLGEAFCRETLGIPADRLNDPSFDLLRHLGFTRAQIEAANDHVCGTMTLEGAPHLKPEHY
PVFDCANACGKKGTRYLSVDSHIRMMAAAQSFISGAISKTINMPNSASIADALAAYELSW
SLGIKANALYRDGSKLSQPLASALVEDDEEAEEILASGSLQEKAVVIAEKVVEKIIVKEA
VRSHREKLPQRRKGYTQKAIIGGHKVYLRTGEYDDGKLGEIFIDMHKEGAGFRAMMNNFA
IAVSVGLQYGVPLEEFVDAFTFTRFEPAGMVQGNDSIKNATSILDYVFRELAVSYLDRTD
LAHVKPQGARFDDLGGGEAESQPNVAPVSEGASRSLEMLKQISSTGYLRKRLPQDLVALQ
SGVSVAAVATAEGAAAAVGVVAMDARTKARMQGYEGDPCGECGNYTLVRNGTCMKCNTCG
ATSGCS
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgcggatcgaacggcgcttcaccacggtcgagagcggggcttacggcgcgctttccttt
accaccaccagcagcgagatccgcaacccggacggcaccgtcgtctttcgcaacgacgcg
gtcgaggtgccccagggctggagccaggtcgcctcggacgtgatcgcgcagaaatatttc
cgcaaggccggcgtgccggcgcggctcaagcgcgtcaaggaaaagggcgtgcccgagttc
ctgtggcgctcggtgcccgacgaggcggcgctggcggccctgcccgaggaggcgcgcttt
ggcggcgagagcagcgcgcggcaggtcttcgaccgcatggccggcgcctggacctattgg
ggctggaagggcgggtatttttccaacgaagaagacgcccgcgcctattacgacgaaatg
cgctacatgctggccagccagatgggggcgccgaacagcccgcaatggttcaacaccggc
ctgcattgggcctatggcatcgacggccccggccagggccatttctatgtcgactacaag
accggcaagctggtccggtcggacagcgcctatgaacatccccagccgcatgcctgcttc
atccagtccgtcgccgacgacctggtgaacgagggcggcatcatggacctgtgggtccgc
gaggcgcggcttttcaaatacggctcgggcacgggcaccaatttttcgtcccttcgtggg
gagggcgagaaactgtcgggcggcgggaaatcttcgggactcatgggcttcctgaagatc
ggagaccgcgcagccggcgcgatcaagtcgggcggaacgacccggcgcgcggcaaagatg
gtgatctgcgacatggatcaccccgacatcgagcagttcatcaactggaaggtcatcgaa
gaacagaaggtcgcctcgctggtggcgggttcgaagatgcatgagcgcgagctgaatgcc
atcttcgccgccatccgcgcatgggacggcagcgccgaagatgccaccgatcccgcccgg
aacgccgcgctgaaggcggcgatccgcggggcgaagcgcgtgatgatcccggagacctat
atcaaccgggttcttcaatatgcccgccagggctttgattccattgagttcccgacctat
gataccgattgggactcggaagcctatgtctcggtctcggggcagaactcgaacaactcg
gtgcgggtgacggatgccttcctgcgcgccgtgcgcgacgacctgccctgggagctggtg
cggcgcaccgacgggcgggtgacgaagaccgtctcggcgcgcgagctgtggcagcagatc
ggccatgccgcctgggcctgcgccgatccgggcatccagttccacgacaccatcaatgcc
tggcacacctgccccgaggacgggccgatccgcgcctcgaacccgtgcagcgaatacatg
ttcctggacgacaccgcctgcaacctcgcgtcgatgaacctgctgagcttctggcaggac
ggcgagttcgacgccgacggctatgtccatgcctgccggctgtggacggtgacgctggaa
atctcggtgatgatggcgcagttccccagccgcgagatcgcgcagcgcagctatgacttc
cgcacgctggggctgggctatgccaatatcggcgggcttctgatgaacatggggctgggc
tatgacagcgagcagggccgggcgctgtgcggcgcgctgagcgcgatcatgaccggcgtc
tcctatgccacctcggccgagatggcggcggagctggggccgttccccggctatggcaag
aacgccgggcacatgctgcgggtgatccgcaaccatcgcgcggcggcttacgggaccggc
gcctatcagggcgtgaacgtggccccggtggagctggacgccgcgaattgccccgacccg
cggctggtggccctggcgcagggcgcctgggacgaggcgctgaccctgggcgaggagcac
ggctatcgcaacgcccaggcgacggtgatcgcgcccaccggcaccatcgggctggtgatg
gattgcgacaccaccggcatcgagccggatttcgcgctggtgaagttcaagaagctggcc
ggcggcggctatttcaagatcatcaaccgctcggttcccgcggcgcttgaggcgctgggt
tacggctcggcccagatcgaggagatcatcgcctatgccgtgggccatgcgagcctgggc
aattgccctggcatcaaccatgccagcctggtcggccacggcttcggcccgcgcgagctg
gaaaagatcgacgcggcgctggcatcggccttcgacatccgcttcgtcttcaaccagtgg
acgctgggcgaggccttctgccgcgagacgctgggcatcccggccgacaggctgaacgac
ccgagcttcgacctgctgcggcacctgggcttcacgcgggcgcagatcgaggccgccaac
gaccatgtctgcggcaccatgacgctggagggcgcgccgcatctgaagccggaacattac
ccggtcttcgactgcgccaatgcctgcggcaagaagggtacccgctacctgtcggtggac
agccatatccgcatgatggcggcggcgcagagcttcatctcgggcgcgatctccaagacc
atcaacatgcccaacagcgcaagcatcgccgatgcgctcgccgcctatgagctgagctgg
tcgctgggcatcaaggcgaatgcgctttatcgcgacggctcgaaactgtcgcagccgctg
gcctcggcgctggtcgaggacgacgaggaggctgaggagatcctggccagcggcagcttg
caggaaaaggccgtggtcatcgccgagaaggtggtcgagaagatcatcgtcaaggaagcc
gtgcgcagccatcgcgaaaagctgccgcagcgccgcaagggctatacccagaaggcgatc
atcggcgggcacaaggtctatctgcgcaccggcgaatatgacgacggcaagctgggcgag
atcttcatcgacatgcacaaggaaggcgcgggcttccgggcgatgatgaacaatttcgcc
atcgccgtgtcggtgggcctgcaatacggcgtgccgctggaggaattcgtcgatgccttc
accttcacccgcttcgagccggcggggatggtccagggcaatgacagcatcaagaacgcg
acctcgatcctcgactacgtgttccgcgaactggccgtgtcctatctggaccgcaccgac
ctggcgcatgtgaagccgcagggcgcgcgcttcgacgaccttggcggcggcgaggccgag
agccagcccaatgtcgccccggtcagcgagggcgcctcgcgctcgctcgagatgctcaag
cagatcagctcgaccggctatctgcgcaagcgcctgccgcaggatctggtggcgctgcaa
tccggggtctcggttgccgcggtggcgacggccgagggggccgcggctgcggtgggcgtc
gtcgccatggatgcgcgcaccaaggcgcggatgcagggctacgagggcgatccctgcggg
gaatgcggcaattacacgctggtgcgcaacggcacctgcatgaagtgcaacacctgcggc
gcgaccagcggttgcagctga

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