Paracoccus ferrooxidans: E3U26_05100
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Entry
E3U26_05100 CDS
T09619
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pfeo
Paracoccus ferrooxidans
Pathway
pfeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E3U26_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfeo03021
]
E3U26_05100
03400 DNA repair and recombination proteins [BR:
pfeo03400
]
E3U26_05100
Enzymes [BR:
pfeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E3U26_05100
Transcription machinery [BR:
pfeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E3U26_05100
DNA repair and recombination proteins [BR:
pfeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E3U26_05100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WGR60120
LinkDB
All DBs
Position
complement(1016729..1017745)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEIKPGADSSRVATVVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVPGVREDVTDVVLNLKGVTLKMDVDAPKRLTLSAKGPGEVKAGDIQE
TAGITILNRDHVICHLDEGAELHMELTVANGKGYVAADKNRPEDAPIGLIPIDAIFSPVK
RVSYEVTPTREGQVLDYDKLTMKVETDGSLTPEDAVAYAARIIQDQLSVFVNFDEPETAT
RSDAEDGLEFDPRLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVVDWPPENIEDLAKRFDDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgaactcatcaagcccacccagcttgaaatcaagccgggc
gccgactcgtcccgcgtggccaccgtggtcgcggaaccgctggagcgcggcttcggcctg
acgctgggcaatgcgctgcgccgggtgctgctgtcgtcgctgcagggcgcggccatcacc
tcggtgcagatcgacaacgtgctgcacgaattctcgtccgtccccggcgtgcgcgaggac
gtgaccgatgtcgtgctgaacctcaagggcgtgacgctgaagatggacgtcgacgcgccc
aagcgcctgacgctttctgcgaagggtccgggcgaggtcaaggccggcgacatccaggaa
accgccggcatcaccatcctgaaccgcgaccatgtcatctgccacctcgacgagggggcg
gagctgcacatggaactgaccgtcgccaatggcaagggctatgtcgccgccgacaagaac
cgccccgaggacgcgcccatcggcctgattccgatcgacgccatcttctcgccggtcaag
cgcgtcagctacgaagtcacgcccacccgcgagggccaggtgctggactatgacaagctg
accatgaaggtcgagaccgacggttcgctgaccccggaagacgccgtggcctatgccgcc
cgcatcatccaggaccagctgtcggtcttcgtcaacttcgacgagccggaaaccgccacc
cgctcggatgccgaggacgggctggagttcgatccgcgcctgctgaagaaggtcgacgag
ctggaactgtcggtgcgttcggcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggccgagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtccggcatgggcctgcacctcggcatggatgtcgtg
gactggccgccggaaaacatcgaggatctggccaagcgtttcgacgaccagttctga
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