KEGG   Paracoccus ferrooxidans: E3U26_06855
Entry
E3U26_06855       CDS       T09619                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pfeo  Paracoccus ferrooxidans
Brite
KEGG Orthology (KO) [BR:pfeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfeo03400]
    E3U26_06855
Enzymes [BR:pfeo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E3U26_06855
    5.6.2.6  RNA 3'-5' helicase
     E3U26_06855
DNA repair and recombination proteins [BR:pfeo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    E3U26_06855
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-ProteinID: WGR60443
LinkDB
Position
complement(1361195..1363627)
AA seq 810 aa
MILPPAFQDWFARQGWQPHPHQLALLAATGDSLLIAPTGGGKTLAGFLPSLVELAQAARP
DGYLGNREAARGGLHTLYVSPLKALTADIGRNLARPVAELGLGVRVEDRTGDTGQSQRRR
QRVDPPEILLTTPESLALMLSYPEAPAIFGGLRRVVLDELHALAESKRGDQLMLGLARLR
ALSPGLRVTGLSATVEDPQALAGFMAGAAPVTVVEADPGPDPDIAMLATVRPAPWSGGGG
HHAIPEVLAAVKAARTTIIFINTRAQAELFFQALWAANDENLPIGLHHGSLAREQRARVE
AAMAAGELRAVVATGSLDLGIDWGAVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKARI
VPANRFEQIECVAALEAVRVRDLDGDPRGPGPLDVLCQHILLTACAAPFDADALYAEVAT
AGPYRGLSRADFDACLDFAATGGYALRAYDRWQRLMLRGGLWHLRDARAAKLLRMNVGTI
VEAEMMKVRLRGRGGAPLGEVEEAFAASLTPGDSFLIGGRVVRMDAMREMVIEVTPDPTR
QPKIAVYSGVKLAMSTQLSHRVLALIGDPSRHDALPAQTRDWLGLQAEVSVLPEPGLLLS
ESFPHAGLWHFALYGFAGRNALQTLGLLLTREMEEEGLGPLGFLSTDYALLVWSLDPLCD
PTPLLDRARLRAGLGDWLGGNAVMKRTFRNVATVAGLIQRNMPGQRKSGRQATFSSDILY
DTLRKYDPGHLMLRITAEEAGRGLVDFGRIEEMLDRSPRREHRMLDRVSPMAAPLLLEVG
RVPIRGEGRERLAQIEAEALMRDAGLERIA
NT seq 2433 nt   +upstreamnt  +downstreamnt
gtgatcctgccgcccgcgttccaggactggttcgcgcgccagggctggcagccgcatccg
catcagctggcgctgctggcggcgacgggcgacagcctgctgatcgcgccgaccggcggc
ggcaagacgctggcggggttcctgccctcgctggtggagctggcgcaggcggcgcggccg
gatgggtatttgggcaacagagaagcggcgcggggcgggctgcatacgctttacgtctcg
ccgctgaaggcattgactgccgacatcggccgcaacctggcgcggccggtggcggaactg
gggctgggggtgcgggtcgaggaccggaccggcgacaccgggcagagccagcgccggcgc
cagcgcgtcgatccgcccgagatcctgctgaccacgcccgagagcctggccctgatgctg
agctatcccgaggcgccggcgatctttggcggtttgcgccgggtggtgctggacgaattg
cacgccctggcggaaagcaagcgcggcgaccagctgatgctgggcctggcgcggctgcgg
gccttgtcgccggggctgcgggtgacgggcctgtcggcgacggtcgaggatccgcaggcg
ctggccgggttcatggcaggcgccgcgccggtgacggtggtcgaggccgatcccggcccc
gatcccgacatcgccatgctggccaccgtgcggcctgcgccctggtccggcggtggcggg
catcatgccatccccgaggtgctggcggcggtgaaggctgcgcgcaccaccatcatcttc
atcaatacccgcgcccaggccgagctgttcttccaggcgctttgggccgcgaatgacgag
aacctgcccatcgggttgcaccacggcagcctggcgcgcgagcagcgggcgcgggtcgag
gcggcgatggcggcgggcgaattgcgtgccgtggtggcgaccggcagcctggacctgggc
atcgactggggcgcggtggacctggtgatccaggtcggcgcgcccaagaacgtcaagcgg
ctggtgcagcgcatcggtcgggcgaaccatcgctataatgcgccctcgaaggcgcggatc
gtgccggcgaaccgtttcgagcagatcgaatgcgtcgccgcgctggaggcggtgcgggtg
cgcgacctggatggcgatccgcgcgggccggggccgctcgatgtgctgtgccagcatatc
ctgttgactgcctgcgctgcgcccttcgatgccgatgcgctttatgccgaggtcgccacc
gccggcccctatcgcgggctttcccgtgccgatttcgacgcctgcctggatttcgccgcg
accgggggctatgccctgcgcgcctatgaccgctggcagcggctgatgctgcgcgggggc
ctgtggcatctgcgcgacgcgcgggcggcgaagctgctgcggatgaatgtcggcaccatc
gtcgaggccgagatgatgaaggtccgcctgcgcggccgcggcggggcgcccctgggcgag
gtcgaggaagcctttgctgccagcctgacgccgggcgacagcttcctgatcggcgggcgg
gtggtgcgcatggatgcgatgcgcgagatggtgatcgaggtcacgcccgacccgacgcgg
cagcccaagatcgcggtctattccggcgtcaagctggccatgtccacgcagctttcgcat
cgggtgctggcgctgatcggcgatccgtcgcggcacgatgccttgcccgcgcagacgcgg
gactggctgggcttgcaggccgaggtctcggtcctgccggaaccggggctgctgctgtcc
gaaagctttccccatgccgggctgtggcatttcgcgctttacggtttcgccggtcgcaat
gccttgcagacgctgggcctgctgctgacccgcgagatggaggaggaggggctgggcccg
ctggggttcctgtcgaccgattacgcgctgctggtctggtcgctggacccgctgtgcgat
cccacgccgctgctggaccgggcgcggctgcgggcgggcctgggcgactggctgggcggg
aatgcggtgatgaagcgcacctttcgcaatgtcgccactgtcgctgggctgatccagcgc
aacatgcccggccaacgcaagagcgggcggcaggcgacattttccagcgacatcctttac
gacaccctgcgcaaatacgaccccggccacctgatgctgcgcatcaccgccgaggaggcg
gggcggggccttgtcgatttcggccggatcgaggagatgctggaccgctcgccccggcgc
gagcatcggatgctggaccgcgtttcgcccatggccgcgcccttgctgctggaggtcggc
cgggtgccgatccgcggcgagggccgcgagcggctggcgcagatcgaggccgaggcactg
atgcgcgacgccgggctggaaaggatcgcatga

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