Paracoccus ferrooxidans: E3U26_08480
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Entry
E3U26_08480 CDS
T09619
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pfeo
Paracoccus ferrooxidans
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfeo03400
]
E3U26_08480 (addA)
Enzymes [BR:
pfeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3U26_08480 (addA)
DNA repair and recombination proteins [BR:
pfeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E3U26_08480 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Gelsolin
DUF2000
DUF3638
Motif
Other DBs
NCBI-ProteinID:
WGR60727
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All DBs
Position
1674751..1678125
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AA seq
1124 aa
AA seq
DB search
MMDEATLAQVRAADPHRSTWLTANAGSGKTRVLTDRVARLLLAGTAPERILCLTYTKAAA
TEMQNRLLARLGQWAMLPEPALRAELARLGEAGAPDLPAARRLFARAIETPGGLKVQTIH
SFCAGVLRRFPIEAGVPHGFTELDDRSAALIRAEIIEEMARDHAPELEDLLALHSGEKLD
AFLAGLRGFDAPADGDALWAACGLAPGEEMRALLAECFADGATVVAALVPHLLKGSTTDQ
KAAAKLGPGNWTQPGLAELAILESVLLTGAGAKEPFTAKYDSFPTKALRSGPCADLLDDL
AILMERVESARPRRIALAHAERTLALHRFGHGFLTRYRAQKAAHGHLDFDDLIDRTARLL
SENSMAQWVLFRLDGGIDHILVDEAQDTSPAQWQVIERLTDEFTAGQGARPGSRSLFVVG
DPKQSIYSFQGADIAVFEARRTGFAQAFQAVQNPMQVLELRHSFRSSTAILSLVDQVFAG
DAARGLGDPPQHRAFRTGMPGRVDLWPAIPKPDKPEPGDWTDPVDQPAENSETVQLARAI
ARAVDEMLGQPILDAKTGQRRRIRAGDVLILVQRRSELFAEIIAALKSANLPVAGADRLK
LAGEMAVQDIGALLSVLATPEDDLSLAACLRSPLFGLTEEQLYRLAAGRKRGEYLWRRLR
ESTHRHAVDVLADLMGQTGFMRPYDLVQRLLIRHGGRERLIARLGPEAQDGIDELLSQAL
SYESSETPSLTGFLVWLTGDDVEVRRQPGSAGDGEGLIRVMTVHGSKGLESPIVIMPDAA
KRKPPREAPVLPGPDGLALWRGRKGERPDPVEELAAAQTERQLQERKRLLYVGLTRAESW
LIVAAAGETGQGEDSWHAMVEAGLGRSDLAQARLPAPWGGEIRRLSFGDWPEDAPDAVPA
ERPVLAEPDWLRAPPPPAPEKLRPVAATALGGAKVIGAPGEGDAAAAMLFGTRLHLLLEH
LPGRDPAEWPDLARDVLADAEGGLPAPEELAALLAEARAVIEAPDLAQVFALSDAAEVMA
EVALAAPVPGIGILTGAVDRLVVEPGRILAVDYKSNREVPGTPQAVPLGILRQMAAYRAA
LRSIWPQARVEVAVLWTAARSLMALPDDLLDRVMAGLDPNRPGA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaggcgacgctggcgcaggtgcgggcggcggacccgcatcgctcgacctgg
ctgacggccaacgccggctcgggcaagacgcgggtgctgaccgaccgggtggcgcggctg
ctcttggccgggaccgcgcccgagcgcatcctgtgcctgacctataccaaggccgcggcg
accgagatgcagaaccgcctgctggcgcggctgggccaatgggccatgctgcccgaaccg
gcgctgcgcgcggaactggcgcggctgggcgaggcgggcgcccccgacctgcccgccgcg
cgccggctgttcgcccgcgccatcgagacgccgggcggcctcaaggtccagaccatccac
agcttctgcgcgggcgtcctgcgccgctttccgatcgaggccggcgtgccgcacggcttc
accgagcttgacgaccgcagcgccgcgctgatccgcgccgagatcatcgaggaaatggcc
cgagaccatgcgcccgagctggaagacctgctggccttgcattcgggcgaaaagctcgac
gctttcctcgccggtctgcgggggttcgatgcccccgcggacggggacgcgctctgggcg
gcctgcgggctggcgccgggcgaggagatgcgggcgctcctggcggaatgcttcgccgat
ggcgccacggtcgtcgccgcgctggtcccgcatctgctgaaaggcagcaccaccgaccag
aaggcggcggcgaagcttggccccggcaactggacgcagccgggcctggcggaactggcg
atcctcgaatccgtgctgctgaccggcgccggcgccaaggagccctttaccgcgaaatac
gacagcttcccgaccaaggcgctgcgcagcggcccctgcgccgacctgctcgacgacctg
gcgatcctgatggaacgggtcgaatccgcccgcccccgccgcatcgccttggcccatgcc
gagcgcacgctggcgctgcaccgtttcggccatggcttcctgacccgctaccgggcgcag
aaggcggcgcatggccacctggatttcgacgacctgatcgaccgcaccgcgcggcttctg
tcggaaaacagcatggcgcaatgggtgctgttccggctggacggcggcatcgaccatatc
ctggtcgacgaggcgcaggacaccagcccggcgcaatggcaggtgatcgagcggctgacg
gacgagttcaccgccggccagggcgcgcggcccggcagccgcagcctgttcgtggtgggc
gaccccaagcagtcgatctacagcttccagggcgccgacatcgcggtgttcgaggcccgc
cgcaccggctttgcgcaagccttccaggcggtgcagaacccgatgcaggttctggagctg
cggcattccttccgcagctcgaccgcgatcctgtcgctggtcgaccaggtctttgccggc
gacgcggcgcgcggcctgggcgatccgccgcagcaccgcgcctttcgcaccgggatgccg
ggccgggtggacctgtggccggcgatccccaagcccgacaagcccgagcccggcgactgg
accgacccggtggaccagccggccgagaattcggaaaccgtgcagctggcccgcgccatc
gcccgcgccgtggacgagatgctgggccagccgatcctggacgccaagaccggccagcgg
cgccgcatccgcgccggcgacgtgctgatcctggtccagcgccgctcggaactgtttgcc
gagatcatcgcggcgctgaaatcggcgaacctgcccgtcgccggcgccgaccggctgaag
ctggccggggaaatggcggtgcaggacattggcgccctcttgtcggtgctggccacgccc
gaggacgacctgtcgctggccgcctgcctgcgctcgccgctgttcggcctgaccgaggag
cagctttatcgcctcgccgccgggcgcaagcgtggcgaatacctgtggcggcggctgcgg
gaatcgacgcatcgccatgcggtggatgtgctggccgacctgatgggccagaccggcttc
atgcggccctatgacctggtccagcgcctgctgatccgccatggcgggcgcgagcggctg
atcgcccggctgggccccgaggcgcaggacggcatcgacgagctgctgtcgcaggcgctg
agctatgaaagctcggagacgccctcgctgaccggcttcctggtctggctgaccggcgac
gatgtcgaggtccgccgccagcccggctcggccggggatggcgaggggctgatccgggtg
atgaccgtgcatggctcgaaagggctggaaagccccatcgtcatcatgcccgacgccgcc
aagcgcaagcccccgcgcgaggcgccggtgctgcccggcccggacgggctggcgctgtgg
cgcggccgcaagggcgagcggcccgatccggtcgaggaactggccgccgcccagaccgag
cggcagctgcaggaacgcaagcggctgctctatgtcggcctgacccgcgccgaaagctgg
ctgatcgttgccgcggcgggcgagaccggccagggcgaggacagctggcacgccatggtc
gaggccgggctgggccgctccgacctggcccaggcgcgcctgcccgcgccctgggggggc
gagatccgccggctgtcctttggcgactggcccgaggacgcgccggatgcggtgccggcc
gaaaggccggtgctggccgagccggactggctgcgcgcgcccccgccccccgcgcccgaa
aagctgcgccccgtcgccgcgacggctctgggcggcgccaaggtgatcggcgcgcccggc
gaaggcgatgccgcggcggcgatgctgttcggcacgcggctgcatctgctgctggagcat
ctgccgggccgcgatcccgccgaatggcccgatctggcccgcgacgtgctggccgatgcc
gagggcggcctgccggcccccgaggaactggcggcgctgctggccgaggcgcgcgcggtg
atcgaggcgccggacctggcgcaggtctttgcgctttccgacgcggccgaggtgatggcc
gaggtagcgctggccgcgccggtgccgggcatcggcatcctgaccggggcggtggaccgg
ctggtggtcgagcccggccgcatcctggcggtggactacaagtcgaaccgcgaggtgccg
gggacgccgcaggcggtgccgctgggcatcctgcgacagatggccgcctatcgcgcggct
ttgcggtcgatctggccgcaggcgcgggtcgaggttgcggtgctttggacggctgcgcgc
agcctgatggcgctgcccgacgacttgctggatcgggtgatggcgggccttgaccccaac
cgccccggtgcctag
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