Paracoccus ferrooxidans: E3U26_09310
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Entry
E3U26_09310 CDS
T09619
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pfeo
Paracoccus ferrooxidans
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfeo03016
]
E3U26_09310
Enzymes [BR:
pfeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E3U26_09310
Transfer RNA biogenesis [BR:
pfeo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E3U26_09310
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WGR60881
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All DBs
Position
1853142..1853756
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AA seq
204 aa
AA seq
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MTITLYRNDLPDDLDLGPVVAIDTETMGLDPRRDRLCLVQLSSGDGNAHLVQIAQGQRAA
PNLVRMLADPQVLKLFHFGRFDIAALEAAFGVATKPVWCTKIASKMVRTYTDRHGLKYLL
SDLVGVDISKQQQTSDWGAAELSEAQREYAASDVLHLHALKAELEKRLAREGRLGLAQAC
FDFLPTRAHLDLLGWGDENDIFHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacgattaccctttaccgcaacgacctgccggacgacctggacctgggcccggtcgtg
gccatcgacaccgagacgatggggctggacccgcgccgcgaccggctgtgcctggtgcag
ctgtcctcgggcgacggcaatgcgcatctggtgcagatcgcccagggccagcgcgcggcg
ccgaacctggtgcggatgctggcagatccccaggtgctgaagcttttccacttcgggcgt
ttcgacatcgccgcgctggaggcggccttcggcgtggcgacgaagccggtctggtgcacc
aagatcgccagcaagatggtgcgcacctataccgaccggcacgggctgaaatacctgctt
tcggacctggtcggcgtcgacatctccaagcagcagcagaccagcgactggggcgcggcg
gaactgtccgaggcgcagcgggaatatgccgcctcggacgtgctgcacctgcacgcgctc
aaggccgagctggaaaagcgactggcgcgcgaggggcggctgggcctggcgcaggcctgt
ttcgactttcttcccacccgtgcccatctggacctgctgggctggggggatgaaaacgac
atcttccatcactag
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