Paracoccus ferrooxidans: E3U26_10680
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Entry
E3U26_10680 CDS
T09619
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pfeo
Paracoccus ferrooxidans
Pathway
pfeo00010
Glycolysis / Gluconeogenesis
pfeo00020
Citrate cycle (TCA cycle)
pfeo00260
Glycine, serine and threonine metabolism
pfeo00280
Valine, leucine and isoleucine degradation
pfeo00310
Lysine degradation
pfeo00380
Tryptophan metabolism
pfeo00620
Pyruvate metabolism
pfeo00630
Glyoxylate and dicarboxylate metabolism
pfeo00640
Propanoate metabolism
pfeo00670
One carbon pool by folate
pfeo00785
Lipoic acid metabolism
pfeo01100
Metabolic pathways
pfeo01110
Biosynthesis of secondary metabolites
pfeo01120
Microbial metabolism in diverse environments
pfeo01200
Carbon metabolism
pfeo01210
2-Oxocarboxylic acid metabolism
pfeo01240
Biosynthesis of cofactors
Module
pfeo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfeo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfeo_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pfeo_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pfeo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
E3U26_10680 (lpdA)
00020 Citrate cycle (TCA cycle)
E3U26_10680 (lpdA)
00620 Pyruvate metabolism
E3U26_10680 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
E3U26_10680 (lpdA)
00640 Propanoate metabolism
E3U26_10680 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E3U26_10680 (lpdA)
00280 Valine, leucine and isoleucine degradation
E3U26_10680 (lpdA)
00310 Lysine degradation
E3U26_10680 (lpdA)
00380 Tryptophan metabolism
E3U26_10680 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E3U26_10680 (lpdA)
00670 One carbon pool by folate
E3U26_10680 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfeo04147
]
E3U26_10680 (lpdA)
Enzymes [BR:
pfeo01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
E3U26_10680 (lpdA)
Exosome [BR:
pfeo04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
E3U26_10680 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
GIDA
NAD_binding_8
DAO
HI0933_like
FAD_oxidored
AlaDh_PNT_C
Lys_Orn_oxgnase
2-Hacid_dh_C
Thi4
3HCDH_N
Amino_oxidase
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WGR61140
LinkDB
All DBs
Position
2126146..2127537
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AA seq
463 aa
AA seq
DB search
MAQSFDMVVIGSGPGGYVCAIRGAQLGLKVACIEREHLGGICLNWGCIPTKALLRSAEVF
HLMHRAKEFGLSADKIGYDLSAVVQRSRGVAKQLAGGVGHLLKKNKVTVIMGEASLIAPG
KISVKTDKGAEEVTAKSIVLATGARARELPGLEPDGDLVWNYKHALQPPRMPKKLLVIGS
GAIGIEFASFFNTLGADTTVVEVMDRVLPVEDAEISALAKKQFVKQGMKILEKAAVKKLD
RAKGKVTAHIETGGKTETHEFDTVISAVGIVGNVENLGLEKLGAKIDRTHVVTDEYCRTG
VEGLYAIGDVAGAPWLAHKASHEGVMVAELIAGGHPHPIKPNSIPGCTYCNPQVASVGLT
EEKAKAAGHEVKVGRFPFIGNGKAIALGEPEGLIKTVFDAKTGELLGAHMVGAEVTELIQ
GYVVGRTLETTEAELMETVFPHPTLSEMLHEATLSAYGRAIHF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagcttcgacatggtggtgatcggttccggccctggcggctatgtctgcgcc
atccgcggcgcgcaactgggcctcaaggtggcctgtatcgagcgcgagcatctgggcggc
atctgcctgaactggggctgcatcccgaccaaggcgctgttgcgctcggccgaggtcttt
cacctcatgcaccgcgccaaggaattcggcctttccgccgacaagatcggctatgacctc
agtgccgtggtgcagcgttcgcgcggcgtggccaagcagctcgccggcggcgtcggccac
ctgctgaaaaagaacaaggtcaccgtcatcatgggcgaggccagcctgatcgcccccggc
aagatcagcgtcaagaccgacaagggcgccgaggaagtgaccgcgaaatccatcgtgctg
gccaccggcgcccgcgcccgcgaactgccggggctggaacccgacggcgacctggtctgg
aactacaagcacgccctgcagccgccgcgcatgccgaaaaagctgctggtcatcggctcg
ggcgccatcggcatcgaattcgccagcttcttcaatacgctgggcgccgacaccaccgtg
gtcgaggtcatggaccgcgtgctgccggtcgaggatgcggaaatctcggccctggcgaag
aagcaattcgtcaagcagggcatgaagatcctggaaaaggcggcggtcaagaagctcgac
cgcgcaaagggcaaggtcaccgcccatatcgagaccggcggcaagaccgagacgcatgaa
ttcgacacggtgatctcggccgtcggcatcgtcggcaacgtggaaaacctcggccttgaa
aaactgggcgccaagatcgaccgcacccatgtcgtcaccgacgaatattgccgcaccggc
gtcgaggggctctatgccatcggcgacgtggccggcgcgccctggctcgcccacaaggcc
agccacgaaggcgtgatggtggcggaactcatcgccggcgggcacccgcatccgatcaag
ccgaactcgatccccggctgcacctattgcaacccgcaggtggcctcggtcggcctgacc
gaggaaaaggccaaggccgcgggccatgaggtcaaggtcggccgcttccccttcatcggc
aatggcaaggccatcgctctgggcgagcccgagggcctgatcaagaccgtcttcgacgcc
aagaccggcgagttgctgggcgcccacatggtcggcgcggaagtgaccgagctgatccag
ggctatgtcgtcggccgcacgctggaaaccaccgaggccgagttgatggagacggtcttc
ccgcacccgacgctgtcggagatgctgcacgaggccacgctctcggcctatggccgcgcc
atccacttctga
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