KEGG   Paracoccus ferrooxidans: E3U26_13290
Entry
E3U26_13290       CDS       T09619                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pfeo  Paracoccus ferrooxidans
Pathway
pfeo00010  Glycolysis / Gluconeogenesis
pfeo00020  Citrate cycle (TCA cycle)
pfeo00260  Glycine, serine and threonine metabolism
pfeo00280  Valine, leucine and isoleucine degradation
pfeo00310  Lysine degradation
pfeo00380  Tryptophan metabolism
pfeo00620  Pyruvate metabolism
pfeo00630  Glyoxylate and dicarboxylate metabolism
pfeo00640  Propanoate metabolism
pfeo00670  One carbon pool by folate
pfeo00785  Lipoic acid metabolism
pfeo01100  Metabolic pathways
pfeo01110  Biosynthesis of secondary metabolites
pfeo01120  Microbial metabolism in diverse environments
pfeo01200  Carbon metabolism
pfeo01210  2-Oxocarboxylic acid metabolism
pfeo01240  Biosynthesis of cofactors
Module
pfeo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pfeo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfeo_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pfeo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pfeo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pfeo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E3U26_13290 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E3U26_13290 (lpdA)
   00620 Pyruvate metabolism
    E3U26_13290 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E3U26_13290 (lpdA)
   00640 Propanoate metabolism
    E3U26_13290 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E3U26_13290 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E3U26_13290 (lpdA)
   00310 Lysine degradation
    E3U26_13290 (lpdA)
   00380 Tryptophan metabolism
    E3U26_13290 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E3U26_13290 (lpdA)
   00670 One carbon pool by folate
    E3U26_13290 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfeo04147]
    E3U26_13290 (lpdA)
Enzymes [BR:pfeo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E3U26_13290 (lpdA)
Exosome [BR:pfeo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E3U26_13290 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored NAD_binding_8 DAO FAD_binding_2 HI0933_like FAD_binding_3 GIDA Thi4 Lys_Orn_oxgnase Amino_oxidase 2-Hacid_dh_C 3HCDH_N AlaDh_PNT_C XdhC_C NAD_binding_7 ThiF
Other DBs
NCBI-ProteinID: WGR61748
LinkDB
Position
pFER3:57440..58879
AA seq 479 aa
MQDYDVIVVGAGPGGYVAAIRAAQLGLKTAIVEREHLGGICSNWGCIPTKALLKSAEALE
TARRAADYGVRVEGRITADLAAMVERSRGVAGRMAGGVAMLMRKNRIAVIWGKARLDGPG
AVTVEPAQPHPRNAAAKPPKGALGAGRYTARHVILATGARPRVLPGLEPDGRRVWTYFEA
LAAPELPSHLLVVGSGAIGIEFASFFAALGAQVTVVEAAGRILPAEDAEIADFARQQFAR
RGIAFHTGCTVTQLDRGAEGVTATLRDGKGETHSIEASHVMVAAGVEPNSEDLGLVEAGV
ALERGFVRTDALGRSNVAGIHAIGDLAGGPMLAHKAEHEAVICVEAIAGQNPHALNRDRI
PGCTYCDPQIASVGLTEERARAEGRGIAVGKFPFLANGKAIALGAEQGLVKVIHDRRTGE
LLGAHMVGAEVTEMIQGFVLAMELETTDRELAEAVFPHPTLSETMKEAVLAAMGRAINI
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgcaggattatgatgtcatcgttgtgggcgccggaccgggcggctatgtcgcggcgatc
cgcgcagcgcagctgggcctgaaaaccgccatcgtggagcgcgagcatctgggcggcatc
tgctcgaactggggctgcatcccgaccaaggcgctgctgaaatcggccgaggcgctggaa
accgcccgccgcgcggcggattacggcgtccgggtcgaggggcggatcaccgccgatctg
gcggcgatggtcgaacgctcgcgcggggtcgccggccgcatggccgggggcgtcgccatg
ctgatgcgcaagaaccgcatcgccgtgatctggggcaaggcccggctggacgggccgggc
gccgtgacggtcgaacccgcccagccgcatccccgcaacgcggcggccaagccgcccaag
ggtgcgctgggggccggccgctataccgcgcggcatgtcatcctggccacgggcgcgcgc
ccgcgcgtgctgccggggctggagcccgacggccggcgcgtctggacctatttcgaggcg
ctggccgcgcccgaacttcccagccacctgctggtggtcggctcgggcgccatcggcatc
gagttcgcatccttctttgccgcgcttggcgcgcaggtgacggtggtcgaggcggcgggg
cgcatcctgccggccgaggatgccgagatcgcggatttcgcccgccagcaattcgcccgg
cgcggcatcgcctttcataccggctgcacggtgacgcagcttgaccggggcgcagaaggc
gtgaccgccacgctccgggacggcaagggcgagacgcacagcatcgaggccagccatgtc
atggtcgccgcgggggtcgagcccaacagcgaggacctgggcctggtcgaggccggcgtg
gcgctggagcgcggcttcgtgcgcaccgacgccctgggccgcagcaatgttgcgggcatc
catgccatcggcgacctggccggcgggccgatgctggcgcacaaggccgagcacgaggcg
gtgatctgcgtcgaggccatcgccggccagaacccccatgcgctgaaccgcgaccgcatt
cccggctgcacctattgcgacccgcagatcgcctcggtcgggctgaccgaggaacgggcg
cgggccgagggccggggcatcgcggtcggcaagttcccctttctcgccaatggcaaggcc
atcgcccttggcgccgagcaggggctggtcaaggtcatccacgaccgcaggaccggcgag
cttctgggcgcgcatatggtcggggccgaagtgaccgagatgatccagggcttcgtcctg
gccatggagcttgagacgacggatcgcgaactggccgaggcggtctttccgcacccgacc
ctttccgagacgatgaaagaggcggttctcgccgccatgggccgggcgatcaacatctga

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