Paracoccus ferrooxidans: E3U26_17955
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Entry
E3U26_17955 CDS
T09619
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pfeo
Paracoccus ferrooxidans
Pathway
pfeo00300
Lysine biosynthesis
pfeo01100
Metabolic pathways
pfeo01120
Microbial metabolism in diverse environments
pfeo01230
Biosynthesis of amino acids
Module
pfeo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E3U26_17955 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfeo01002
]
E3U26_17955 (dapE)
Enzymes [BR:
pfeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E3U26_17955 (dapE)
Peptidases and inhibitors [BR:
pfeo01002
]
Metallo peptidases
Family M20
E3U26_17955 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WGR62639
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Position
pFER4:complement(191378..192526)
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AA seq
382 aa
AA seq
DB search
MTTIPDPAQLTARLIRCASVTPDEGGALLLLADVLGAAGFECHRVDREGVPNLFARWGAK
GARSFGFNGHTDVVPPGDPASWTHPPFSGHEAEGWIWGRGATDMKSGVAAFVAAAIGFVT
ETPPPDGAVVLAITGDEEGPGKHGTRALLDWMAAHGERMDVCIVGEPSNPDRMGEMIKIG
RRGSMTLQVEAHGIQGHAAYPHRARNPIHALLRLLHELTEAPLDEGTEHFDPSGLQVTTV
DCGNPASNVIPERVQATINIRFNDAHTSGSLDRMIRARAAAISADTKVDFAISTDVSGES
FLTRPGPFVDLVAGVVREETGLAPALSTSGGTSDARFVKDHCPVLEFGLVGHFMHQVDER
VPAEQVRQLARIYRRILERYFA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatccccgatcccgcccaactgaccgcaaggctgatccgctgcgcctcggtc
acgcccgacgagggcggcgcgctgctgctgctggcggatgtgctgggcgcggcgggcttc
gaatgccatcgcgtcgaccgcgagggggtgccgaacctgttcgcgcgctggggggccaag
ggcgcgcgcagcttcggcttcaacggccataccgacgtggtgccgcccggcgatccggcc
agctggacgcatccgcccttttccgggcacgaggccgagggctggatctggggccggggc
gccaccgacatgaaatccggcgtcgccgccttcgtcgccgccgccatcggcttcgtgacc
gagaccccgccgccggacggcgcggtggtcctggccatcaccggcgacgaggaggggccg
ggcaagcacggcacccgcgcgctgctcgactggatggccgcgcatggcgagcggatggat
gtctgcatcgtcggcgagccctcgaaccccgaccgcatgggcgagatgatcaagatcggc
cgccgcggctcgatgaccctgcaggtcgaggcgcatggcatccagggccatgccgcctat
ccgcatcgcgcccgcaacccgatccacgcgctgctgcggctgctgcacgagctgaccgag
gcgccgctggacgaggggaccgagcatttcgacccctcgggcctgcaggtgacgacggtg
gattgcggcaacccggcctcgaacgtgatcccggaacgggtgcaggcgacgatcaacatc
cgcttcaacgacgcgcatacgtcgggcagcctcgaccgcatgatccgggcgcgggcggcg
gcgatctcggccgataccaaggtggatttcgccatctcgaccgacgtttcgggcgaaagc
ttcctgacccggcccggccccttcgtcgacctggtcgccggcgtggtgcgcgaggagacg
gggctggcccccgcgctttccacctcgggcggcacctcggacgcgcgtttcgtcaaggat
cactgcccggtgcttgaattcgggctggtggggcatttcatgcatcaggtggatgagcgc
gtgccggccgaacaggtgcgccagcttgcccgcatctatcgccgcatcctggagcgttac
ttcgcatga
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