Paracoccus ferrooxidans: E3U26_20195
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Entry
E3U26_20195 CDS
T09619
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfeo
Paracoccus ferrooxidans
Pathway
pfeo03030
DNA replication
pfeo03410
Base excision repair
pfeo03420
Nucleotide excision repair
pfeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3U26_20195 (polA)
03410 Base excision repair
E3U26_20195 (polA)
03420 Nucleotide excision repair
E3U26_20195 (polA)
03440 Homologous recombination
E3U26_20195 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfeo03032
]
E3U26_20195 (polA)
03400 DNA repair and recombination proteins [BR:
pfeo03400
]
E3U26_20195 (polA)
Enzymes [BR:
pfeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3U26_20195 (polA)
DNA replication proteins [BR:
pfeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E3U26_20195 (polA)
DNA repair and recombination proteins [BR:
pfeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E3U26_20195 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3U26_20195 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WGR63023
LinkDB
All DBs
Position
pFER4:640936..643767
Genome browser
AA seq
943 aa
AA seq
DB search
MTDGFGKGHHLHLIDGSAFIFRAYHALPPLTRRSDGLPIGAVAGFCNMVWKYLQDGKGSD
QPTHAAVIFDHSARTFRNDIYPLYKANRPEPPEDLRPQFPLTREATRAFNIACIETEGFE
ADDIIASLACQARDAGGRVTIISSDKDLMQLVGGGVEMMDPIKGKPIGPDEVREKFGVGP
ERVVDVQALAGDSIDNVPGAPGIGIKTAAQLIDEYGDLESLLARAEEIRQPKRRQTLIDH
AEQIRISKRLVELDCRMALDFTLESLEIREPDPEVLLDFLVRMELRTLTKRVAERFGAEP
PSMAEAAPVPAAVAGSGAGTGAAPAAELPAIDRSLYVTIRDEAVLAEWLAEIAEKGVVAI
DTETTGLDEMQADLVGVSLCTGPGRAAYLPLGHVDGAADLFGSGARVEGQMDRERALAML
KPVLEDPSVLKIGQNVKYDWKLLARHGIRMAPLDDTMLLSYALNAGAHNHGMDELADLYL
GHRCLPIKDLIGSGKAQINFSQVTIDKASEYAAEDAEVTWRLWHHLRPKLAPNHVTTAYE
RLERPMIAVLADMEMAGIRIDSEHLKRMSNAFAQKMAGLEAEIHELAGGPFNVGSPKQLG
EILFQRMGLAGGKQGKTGAFSTGAEVLEDLAAEGHELPARVLDWRAISKLKSTYTDALPL
HVNPETGRVHTCYSIAGAQTGRLASTDPNLQNIPVRTDEGRRIREAFVAGPGMRIVSLDY
SQIELRILAHVAQIPALKQAFRDGIDIHAMTASQMFGVPVEGMDPMIRRRAKAINFGVIY
GISGFGLARNLRIPRAEAQAFIDTYFERFPEIRAYMDRTVAGAKQDGFVRTLFGRRIMTP
GINQSGPAAGGARRAAINAPIQGAAADIIRRAMIRMPEAIGHLPARMLLQVHDELVFEVE
ESAVPELVAAARGVMQGAADPAVRLDVPLIVDAGQGANWAEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggattcggcaagggccatcacctccacctgatcgacggctcggccttcatc
tttcgcgcctatcacgcgctgccgccgctgacccggcgctcggacgggcttcccatcggg
gcggtggcgggtttttgcaacatggtctggaaatacctgcaggacggcaagggctcggac
cagccgacccatgccgcggtgatcttcgaccattcggcgcgcaccttccgcaacgacatc
tatccgctctacaaggccaaccggcccgagccgcccgaagacctgcggccgcagttcccg
ctgacccgcgaggcgacgcgggccttcaacatcgcctgcatcgagaccgagggtttcgag
gccgacgacatcatcgcgagccttgcctgccaggcgcgggacgcgggcggtcgggtgacg
atcatcagcagcgacaaggacctgatgcagctggtcggcggcggggtcgagatgatggac
ccgatcaagggcaagcccatcggccccgacgaggtgcgcgagaaattcggcgtcggcccc
gagcgggtggtggatgtgcaggccctggccggcgattccatcgacaacgtgccgggcgcg
ccgggaatcggcatcaagaccgccgcgcaactgattgacgaatacggcgacctggagagc
ctgctggcgcgggcggaggagatcaggcagcccaagcggcgccagacgctgatcgaccat
gccgagcagatccgcatctcgaagcggctggtcgagctggattgccgcatggcgctggac
ttcaccctggagagcctggagatccgcgagcccgatcccgaggtgctgctggatttcctg
gttcggatggagctgcgcaccctgaccaagcgcgtggccgagcggttcggcgccgagccg
ccgagcatggccgaggcagcgccggtgccggccgccgtggccgggagcggggccgggacg
ggggccgcgccggcggccgaactgccggcgatcgaccgcagcctttatgtcaccatccgc
gacgaggcggtgctggccgaatggctggccgagatcgccgaaaagggcgtggtcgccatc
gacaccgagaccaccgggctcgacgagatgcaggccgatctggtcggggtctcgctgtgc
accgggccggggcgggcggcctatctgccgctgggccatgtcgacggcgcggcggacctg
ttcggctcgggcgcgcgggtcgaggggcagatggaccgggagcgggcgctggccatgctc
aagccggtgcttgaggatccctcggtgctgaagatcggccagaacgtcaagtatgactgg
aagcttctggcccgccacggcatccgcatggcgccgctggacgacaccatgctgctgtcc
tatgcgctgaatgccggggcgcacaaccacggcatggacgagctggcggacctgtacctg
ggccatcgctgcctgccgatcaaggatctgatcggctcgggcaaggcgcagatcaatttc
tcgcaggtgacgatcgacaaggccagcgaatatgccgccgaggatgccgaagtgacctgg
cggctctggcatcacctgcgcccgaagctggcgccgaaccatgtcaccaccgcctatgag
cggctggagcggccgatgatcgcggtgctggccgatatggagatggcgggcatccgcatc
gattccgagcatctcaagcgcatgtccaacgcctttgcccagaagatggcggggctggag
gccgagatccacgagctggccggcgggcccttcaacgtgggcagccccaagcagctgggc
gagatcctgttccagcgcatgggcctggccgggggcaagcagggcaagaccggcgccttt
tccaccggggccgaggtgctggaggacctggccgccgaggggcacgagttgccggcgcgg
gtgctggactggcgggcgatctcgaagctgaaatcgacctataccgatgcgctgcccctg
catgtgaaccccgagaccgggcgggtccatacctgctattccatcgccggggcgcagacc
ggccggctggcctcgaccgatccgaacctgcagaacatcccggtcaggaccgacgagggg
cggcgcatccgcgaagccttcgtcgccgggccggggatgcggatcgtcagcctggactac
agccagatcgagctgcggattcttgcgcatgtggcgcagatcccggcgttgaagcaggcg
ttccgtgacggcatcgacatccatgccatgaccgcgagccagatgtttggcgtgccggtc
gagggcatggacccgatgatccgccgccgcgccaaggcgatcaacttcggggtgatctat
ggcatctcgggctttggcctggcgcgcaacctgcgcattccgcgggccgaggcgcaggcc
ttcatcgacacctatttcgagcgcttccccgagatccgcgcctatatggaccgcaccgtc
gccggggccaagcaggacggtttcgtgcgcaccctgttcgggcggcggatcatgacgccg
ggcatcaaccagtccgggccggcggccggcggggcgcggcgggcggcgatcaacgcgccg
atccagggcgcggccgccgacatcatccgccgcgccatgatccgcatgccggaggcgatc
ggccacctgccggcgcggatgctgctgcaggtgcatgacgaactggtcttcgaggtcgag
gaatctgccgtgcccgagctggtcgcggcggcgcgcggcgtcatgcagggcgcggccgat
cccgcggtccggctggacgtgccgctgatcgtcgatgccgggcagggggcgaactgggcc
gaggcgcattga
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