Paracoccus ferrooxidans: E3U26_21515
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Entry
E3U26_21515 CDS
T09619
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pfeo
Paracoccus ferrooxidans
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfeo01002
]
E3U26_21515
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfeo01011
]
E3U26_21515
Peptidases and inhibitors [BR:
pfeo01002
]
Cysteine peptidases
Family C82
E3U26_21515
Peptidoglycan biosynthesis and degradation proteins [BR:
pfeo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
E3U26_21515
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WGR63768
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All DBs
Position
pFER4:complement(930315..931919)
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AA seq
534 aa
AA seq
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MVVAAVLAMPGAAAAQALDAAPVAALPAPRLSFSEREMRLAEQVADHPGLADFYGTNGLK
PIFAGAGGALRRAALIEALGQAASHGLPPARYRQAALRRLDGAGADTVEDEIRFARAFAD
WSRDVSGGILDPRKVEPGIKREVQRPRTGDLLRAFAAADDPAAMLAALPPQDPRYEALRQ
ALARQSRLVAPADAPPVPEGLWREGTSDAAVAALRVRLASVGFAAAPMGSPLTYDGALAQ
AVAAYQQAAALPADGVAGPRTVARLNRGTGPEAEAILVALERMRWMAGHDLNARHVWVNL
PEFNARIYENGREVFETRVVIGKANQEFETPEFSETMKYMVVNPRWNVPRSITVKEYLPR
LQANRHAVSHLDVVDGAGNVIPRDRIDFRKYSAKTFPYRMRQKPSDDNALGQVKFMFPNP
WNIYLHDTPTKHLFNQSSRAYSHGCIRVGRPVDLAHELLKGQVESPEAVFAKALKSGRET
YLNLRPPVPVHLVYFTAFPDETGQIRRFPDIYGRDALVHAALAKAGLDSAGPDE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgcggccgttctggccatgccgggggctgccgcagcccaggcgctggatgcc
gcgcccgtggccgcgcttccggcgccgcggctgagcttttccgaaagggaaatgcggctg
gccgagcaggtcgccgaccatccgggccttgcggatttctatggcacgaacgggctgaag
ccgatcttcgccggtgccgggggcgccctgcgccgggccgcgctgattgaggcgctgggg
caggcggcctcgcacggcttgccgcccgcgcgctatcgccaggccgcgctgcgcaggctt
gacggcgccggcgccgatacggtcgaggacgagatccgctttgcccgcgcctttgccgac
tggagccgggacgtgtcgggcgggatcctcgatccgcgcaaggtcgagccggggatcaag
cgcgaggtgcaacgcccgcgcaccggcgacctgctgcgcgcctttgccgccgccgacgat
ccggcggcgatgctggccgccctgccgccgcaggatccgcgctacgaggcgctgcgccag
gcgcttgcccggcagtcgcggctggtggcgcccgccgatgcgccgccggtgcccgagggg
ctgtggcgcgaggggaccagcgacgccgccgtcgcggccttgcgcgtgcgcctggcctcg
gtcggctttgccgcggcgcccatgggcagcccgctgacctatgacggcgcgctggcgcag
gcggtcgccgcctatcagcaggcggcggcgctgccggccgacggggtggccgggccgcgc
acggtcgcgcggctcaaccgcggcaccggccccgaggccgaggcgatcctggtcgcgctg
gagcggatgcgctggatggccggccacgacctgaacgcccgccacgtctgggtgaacctg
cccgagttcaacgcccgcatctacgagaacggccgcgaggtcttcgagacccgcgtcgtc
atcggcaaggccaaccaggaattcgagacgcccgagttcagcgagacgatgaaatacatg
gtggtcaacccgcgctggaacgtgccgcgctcgatcaccgtcaaggaatacctgccgcgg
ctgcaggccaaccgccacgcggtttcccatctggacgtggtggacggggccggcaacgtc
atcccgcgcgaccgcatcgactttcgcaaatacagcgccaagacctttccctatcgcatg
cggcagaaacccagcgacgacaatgcgctggggcaggtcaagttcatgttcccgaacccc
tggaacatctatctgcacgataccccgaccaagcacctgttcaaccagtcgagccgcgcc
tattcgcatggctgcatccgcgtcggccgccccgtcgacctggcgcatgagctgctgaag
ggccaggtcgaaagccccgaggcggtgttcgccaaggcgctgaaatccgggcgcgagacc
tatctgaacctgcgcccgccggtgccggtgcatctggtctatttcaccgccttccccgac
gagaccggccagatccgccgctttcccgacatctatggccgcgacgcgctggtccatgcc
gccctggccaaggccgggctggattccgccggcccggatgaatag
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