Paracoccus ferrooxidans: E3U26_24020
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Entry
E3U26_24020 CDS
T09619
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfeo
Paracoccus ferrooxidans
Pathway
pfeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3U26_24020 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfeo03400
]
E3U26_24020 (mutM)
Enzymes [BR:
pfeo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E3U26_24020 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E3U26_24020 (mutM)
DNA repair and recombination proteins [BR:
pfeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E3U26_24020 (mutM)
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WGR63714
LinkDB
All DBs
Position
pFER4:1461862..1462707
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AA seq
281 aa
AA seq
DB search
MPELPEVETVRRGLEPHLEGRVIARAEARRPDLRWPLPPDLVQVLTGARVTRLRRRSKYI
LAELEDRGSLLLHLGMSGRMLIEGESQGEFHRDPAILPRHDHVVIWTDQGTRITFNDARR
FGMVDLVALGATHPLLAHLGPEPLSDAFTPEALGRALAGRRTPVKAALLDQRIVAGLGNI
YVSEALHRAGIDPRRLAGAVAAPELAALVGHVRAVLEEAIAAGGSSLRDHRQATGELGYF
QHSFRVYGREGAPCPTPGCAGAVQRIVQSGRSSFFCPLCQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgccagaggtcgaaaccgtccggcgcggccttgagccgcatcttgaaggc
cgcgtgatcgcccgcgccgaggcccgccgccccgacctgcgctggccgctgccgccggac
ctggtgcaggtgctgaccggggcgcgggtgacgcggctgcggcggcgatcgaaatacatc
ctggccgagctggaggatcgcggcagcctgcttttgcacctgggcatgtcggggcggatg
ctgatcgagggggaaagccagggcgagttccaccgcgacccggcgatcctgccgcgccac
gaccacgtggtgatctggaccgaccagggcacgcgcatcaccttcaacgacgcgcggcga
ttcggcatggtggacctggtggcgctgggcgcgacccatccgctgctggcgcatctgggg
cccgagcccctgtccgacgccttcacccccgaggcactggggcgggccctggccgggcgg
cgcacgccggtcaaggcggcgctgctcgaccagcgaatcgtggcggggctgggcaatatc
tatgtctcggaggcgctgcatcgcgccggcatcgacccgcgccggctggccggagcggtc
gccgcccccgaactggcggcgctggtcggccatgtccgcgccgtgctggaagaggcgatc
gccgccgggggatcgtccctgcgcgaccaccggcaggccacgggcgagctgggctatttc
cagcactccttccgcgtctatggccgcgagggcgcgccctgcccgacgccgggctgcgcg
ggcgcggtgcagcgcatcgtccaatccggccggtccagctttttctgcccgctctgccag
aggtga
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