Paludibaculum fermentans: IRI77_00765
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Entry
IRI77_00765 CDS
T06895
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03030
DNA replication
pfer03430
Mismatch repair
pfer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRI77_00765 (dnaX)
03430 Mismatch repair
IRI77_00765 (dnaX)
03440 Homologous recombination
IRI77_00765 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfer03032
]
IRI77_00765 (dnaX)
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_00765 (dnaX)
Enzymes [BR:
pfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRI77_00765 (dnaX)
DNA replication proteins [BR:
pfer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IRI77_00765 (dnaX)
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IRI77_00765 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_14
DUF3646
AAA_5
ResIII
TIP49
AAA_16
AAA_19
AAA_2
AAA_30
AAA_18
Mg_chelatase
DEAD
DUF815
Zeta_toxin
TsaE
nSTAND3
SLFN-g3_helicase
AAA_25
AAA_24
SKI
Motif
Other DBs
NCBI-ProteinID:
QOY88528
UniProt:
A0A7S7NRP4
LinkDB
All DBs
Position
complement(208307..210046)
Genome browser
AA seq
579 aa
AA seq
DB search
MYQVIARKYRPRTFAELIGQEHVRTTLENAITQQRIAHGYILAGQRGTGKTTIARILARC
LNCVEGPTPTPCGVCSSCIETSQSSAPDVIEIDAASNRGINEMRELRENVRYRPSRDRYK
VFIIDEAHQITNEAFNALLKTLEEPPEWAVFVLCTTESHKIPTTIASRCQQFSFRSVDFH
EVVGRMEEICKAEGIEAEPEALAVIAQAGEGSVRDSFSALDQAIACCGNTLTGAAVRDLL
GMYSLASLERVTQALLSQQTAAMLEIVAELESAGKNLQQFCREMARYFRNLLVAKITGKE
TRLIPAAAPEQARMRDTSAQFSEEDLTRWLQLTLELYGQLQYSMQPRLHVELGLMRLVHA
GRIKPIEEALKELAASGGVPAPRPPQATAAAPVRAASVTERSQAPYAAPRPAASASSGPS
YSAPPARTAAPPAPAPARTLAPQPSAPPAPRSTAIEPGSTKEKLIAALQEMRSAMSVQAV
EDSQLIETQGTVEFLAPRSAKLGLMAKDVEKGLTQILGRAVRVKITIDETAVVAAPEKKP
QTSEAEDEASQRAMAHPDVQRFQEIFPGSQVRGVRDLKE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggtcatcgcccgtaagtaccgtccccgcaccttcgccgagctcatcgggcag
gagcatgtgcgcacgacgctcgaaaatgccatcacccagcagcgcatcgcccacggctat
atccttgccggtcaacgcggtacgggcaaaactaccatcgcccgcatcctcgcccgctgc
ctgaattgcgtcgaaggacccacgcccaccccctgcggcgtctgctcctcctgcatcgaa
acctcccaaagcagcgcccccgacgtcatcgagatcgacgcggcctccaatcgcggtatc
aatgagatgcgcgaactgcgcgagaacgtgcgctaccgcccgtcccgcgaccgctacaaa
gtcttcatcattgacgaagcccaccagatcacgaacgaggccttcaacgccctcctgaag
accctggaagagccgcccgagtgggccgtcttcgtcctctgcaccacggaatcccataag
atccccaccaccatcgcctcccgctgccagcagttcagcttccgcagcgtcgacttccac
gaagtcgtcggccgcatggaagagatctgcaaagccgaaggcattgaagccgaacccgaa
gccctggccgtcatcgcccaggccggtgaaggctcggtccgcgactcgttctccgccctc
gatcaggccatcgcctgctgcggcaacacgctcaccggagcggccgtccgcgacctcctc
ggcatgtactcgctggcctccctcgagcgcgtcacccaggccctgctctcccaacagacc
gcggccatgctcgagatcgtggccgaactcgaaagcgccggcaaaaacctccagcagttc
tgccgcgaaatggcccgctacttccgcaacctgctggtcgccaagatcactggcaaggaa
acccggctcatcccggcggcggcccccgaacaggcccgcatgcgcgacacctcggcccag
ttcagcgaagaggacctcacccgctggctgcagctcacccttgaactctacgggcaattg
cagtattcaatgcaaccccggctgcatgtcgaactcggcctgatgcgcctggtgcacgcc
ggacggatcaaacccattgaagaagcgctcaaggaactggccgcaagcggcggcgttccg
gcgccccggccaccccaggcaacagcagcggctccggtccgcgcggcctccgtcaccgaa
cgaagccaggcgccctacgccgcccctcgtccggccgcctccgcgtcctccggcccatcc
tattccgccccgccggcccgcaccgctgcgcctccggccccggcgcctgcccggacactc
gcgccccagcccagcgctccgccggcgccccgctccaccgccatcgagcccggctccacc
aaagagaagctcatcgccgccctccaggagatgcgctccgccatgtcggtccaggcggtc
gaggattcccagctcatcgaaacccagggcacggtcgagttcctcgctccgcgctccgcc
aagctcggcctcatggccaaggacgtcgaaaaaggactgacccagatcctgggccgggcc
gtgcgcgtcaagattacaatcgatgaaaccgccgtcgtggcggcgcccgagaagaaaccc
cagacgtcggaagccgaagacgaagcatcccagcgtgcaatggcccatccggacgtgcaa
cgctttcaagagatattccccggcagccaggtgcggggcgtacgagacctgaaggagtag
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