Paludibaculum fermentans: IRI77_03105
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Entry
IRI77_03105 CDS
T06895
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfer03000
]
IRI77_03105
Transcription factors [BR:
pfer03000
]
Prokaryotic type
Helix-turn-helix
Other families
IRI77_03105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
PAS_4
PAS_3
Sigma54_activ_2
PAS
HTH_8
PAS_8
Mg_chelatase
AAA_5
AAA_16
AAA_19
AAA
AAA_7
Diguanyl_cycl_sensor
TIP49
Motif
Other DBs
NCBI-ProteinID:
QOY88966
UniProt:
A0A7S7NSE0
LinkDB
All DBs
Position
766272..768419
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AA seq
715 aa
AA seq
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MKPHLHIEPAGSLQSRPEPQAVLSPWLVENGLRELQSLFRAVVFHPSSPILIADDDRNYQ
EASVGAGKLFGLQRENIIGRRLDDFLAPSVSSLLQERWQQFLKDGDQVGTLQLLRPDGSS
YDVEYRARGNVLPVRHLLLLKDKLPSSGGAASAEEMPNWVQDYALCLLDADGHIVAWYGG
AERMYGYRSEEVLGAGLAFFYPADDRQLVRMERKLLRAAREGHAASEAWHCRKDGSQFWA
NSVTMALRDEAGILQGYARVVRDFTDRHERDEALDIRRAELRTEADQSTIAGVASGEFER
IAEMNDPLLEMLGYTREDLLAGRIVWASLTPKEYAAADEFAHEEGLRFGASSPFEKELLR
KDGTRVSVRVATAVLKLSPFRWISFVTDLRSEPGAQVSLDSLVEKPQHNFPEIVGSSRVL
KRVLAQVELVAPTDATVLVLGETGTGKEMIALALHRLSPRRNFPFVSVNCAAIPTGLLES
ELFGYEKGAFTGALQQKIGRFEMAHRGTLFLDEVGDIPLELQPKLLRALQEKCFERLGST
RTTPIDIRLVAATNQNLTQMVGDKLFRSDLYYRLKVFPVTLPALRERPEDIPLLARHFTK
KYAERMGRRIDLISSATLAAMVDWPWPGNIRELENFIEKSVILSRGTSLRAPLAELRATT
PLQTGSALEDVERDHIVRILRESGGVISVAARRLRIPRTTLNALMKRLHVSRTGL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaagccccatctacacatagaacctgccggatccctgcagtcccggcccgagccgcag
gctgtcctgtctccctggctcgtcgaaaacggcctgagagaactccagtcgctcttccgt
gccgtcgtcttccacccgtcttcgcccatcctgattgccgatgatgatcgcaattatcag
gaagccagtgtgggcgcgggcaagcttttcgggctgcagcgggaaaacatcattggccgc
cgtctcgacgacttcctggcgccctcggtctcctcactcctgcaggagcgctggcagcag
ttcctcaaggatggcgaccaggtgggcaccctgcaactgctgcgcccggacggaagctca
tacgatgttgaataccgcgcccgcggcaacgtactcccggtccgtcatctgctgctgctg
aaagacaagctcccgtcatccggaggagctgccagcgccgaggagatgcccaactgggtg
caggactacgccctgtgccttctcgacgccgatggccacatcgttgcctggtacggcggc
gcagagcggatgtacggctacaggtcagaggaagtccttggagccggccttgcgttcttc
tatccggccgacgacaggcagctcgtccgaatggagcgcaaactgctgcgcgcggcccgg
gaaggccacgctgccagtgaagcctggcactgccgaaaggacggctcccaattctgggcg
aactccgtcaccatggcactccgtgacgaagcgggtatccttcagggttatgcccgcgtg
gtgcgtgacttcactgaccggcatgagcgcgatgaggcactcgatatccggcgcgccgag
cttcggaccgaggccgaccagtccaccattgcgggcgtcgcctccggcgagttcgaacgg
attgccgagatgaatgacccgctgctcgagatgctcggctatacgcgcgaagatctcctg
gccgggcgcatcgtttgggcctccctgacgccgaaggagtacgccgccgccgacgagttc
gcccacgaagagggtttgcgctttggcgcctccagtccgtttgagaaggagctgctccgc
aaggacggcactcgcgtgagcgtgcgtgtggctacggcggttctcaagctgtctccgttc
cgctggatcagcttcgtgacggatctgcggtcggaacccggcgcgcaggtttcgctggat
tccctggtcgagaagccgcaacacaacttcccggagattgtggggtccagccgcgtcctg
aagagagttctcgcccaggtcgagctcgtcgcacccacggatgcgactgtgctggtgctg
ggggaaaccggcaccggcaaggagatgatcgcgctcgcgctgcaccggctgagtccccgc
cgcaatttccctttcgtcagcgtgaactgcgccgccattccgaccggcctgctggaaagt
gaactgttcggctatgagaagggcgcctttacgggcgccctgcagcagaagatcggccgc
tttgagatggcgcaccgggggacgttgtttctcgacgaggtcggggacattcctctcgaa
ctgcagcccaagctgctgcgcgcgctgcaggagaagtgttttgagcgtcttgggagcacg
cgtacgactcccattgatattcgacttgtcgccgccacgaaccagaaccttacccagatg
gtgggcgataagctcttccgcagcgacctttattaccgcctgaaggtgttcccggtgacg
ctgccggcgcttcgtgagaggccggaagacatccctctgctcgcgcgccatttcacgaag
aagtacgcggaaagaatgggccgccggatcgatctcatttcttcggcgaccctggcggcc
atggtcgattggccgtggcccggcaacattcgggaactcgagaactttatcgagaagtcc
gtcatcctgtcccgcggcaccagtctgcgcgcacccctggccgaactgcgcgccacgacg
ccgcttcagaccggctccgccctggaagacgtggaacgcgaccacattgtccgcatcctg
cgggagagcggcggtgtcatcagtgtggctgcccgccggctgcgcatcccccgcacgacc
ctcaacgccctcatgaaaaggctgcatgtctcccgcacgggtctgtag
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