KEGG   Paludibaculum fermentans: IRI77_03350
Entry
IRI77_03350       CDS       T06895                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pfer  Paludibaculum fermentans
Pathway
pfer03030  DNA replication
pfer03430  Mismatch repair
pfer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IRI77_03350
   03430 Mismatch repair
    IRI77_03350
   03440 Homologous recombination
    IRI77_03350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfer03032]
    IRI77_03350
   03400 DNA repair and recombination proteins [BR:pfer03400]
    IRI77_03350
Enzymes [BR:pfer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IRI77_03350
DNA replication proteins [BR:pfer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IRI77_03350
DNA repair and recombination proteins [BR:pfer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IRI77_03350
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: QOY89008
UniProt: A0A7S7NSM1
LinkDB
Position
complement(834119..834727)
AA seq 202 aa
MSWPPETPNEQVRFVVLDSETTGLDPRKDRIVTIGAIAIVNNEILLEDSFEAMVKVAYNS
SAVTVHGVTREQSLAGLDEREALEKFLTYLGDGVIVGHHISHDVETFNAGYERHFGFRLQ
NSSLDTMDLTLHLERDGAFAGRDPIQQFSLDALCTLFGIIPHDRHTAAGDAFMTALVFQR
LLRLAAKHGRTSLARLTEPFVP
NT seq 609 nt   +upstreamnt  +downstreamnt
ttgagctggccacccgaaacacccaacgagcaggtccgcttcgtcgtcctcgactccgaa
acgaccggcctggacccgcgcaaggaccgcatcgtcaccatcggcgccatcgccatcgtc
aacaacgagattttgctcgaggattcgttcgaggccatggtgaaggtggcctacaactcc
agcgccgtgacggtgcacggggtcacccgtgaacaaagcttggcgggcctcgacgaacga
gaggccttggagaagttcctcacctacctgggggacggcgtcattgtcggccaccacatc
agtcacgacgtcgaaaccttcaacgccggctacgagcgccacttcggctttcgattgcag
aactccagcctggatacgatggacctcaccctgcacctcgaacgcgacggagccttcgcc
ggtcgcgaccccatccaacagttctccctcgatgccctgtgtacgctcttcggcatcatc
ccccacgaccggcacaccgccgccggcgacgccttcatgacggccctggtcttccagcgc
ctgctccgcctcgccgcaaagcacggccggaccagcctggcacgcctgacagaacccttc
gtaccctaa

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