Paludibaculum fermentans: IRI77_03350
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Entry
IRI77_03350 CDS
T06895
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03030
DNA replication
pfer03430
Mismatch repair
pfer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRI77_03350
03430 Mismatch repair
IRI77_03350
03440 Homologous recombination
IRI77_03350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfer03032
]
IRI77_03350
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_03350
Enzymes [BR:
pfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRI77_03350
DNA replication proteins [BR:
pfer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IRI77_03350
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IRI77_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
QOY89008
UniProt:
A0A7S7NSM1
LinkDB
All DBs
Position
complement(834119..834727)
Genome browser
AA seq
202 aa
AA seq
DB search
MSWPPETPNEQVRFVVLDSETTGLDPRKDRIVTIGAIAIVNNEILLEDSFEAMVKVAYNS
SAVTVHGVTREQSLAGLDEREALEKFLTYLGDGVIVGHHISHDVETFNAGYERHFGFRLQ
NSSLDTMDLTLHLERDGAFAGRDPIQQFSLDALCTLFGIIPHDRHTAAGDAFMTALVFQR
LLRLAAKHGRTSLARLTEPFVP
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttgagctggccacccgaaacacccaacgagcaggtccgcttcgtcgtcctcgactccgaa
acgaccggcctggacccgcgcaaggaccgcatcgtcaccatcggcgccatcgccatcgtc
aacaacgagattttgctcgaggattcgttcgaggccatggtgaaggtggcctacaactcc
agcgccgtgacggtgcacggggtcacccgtgaacaaagcttggcgggcctcgacgaacga
gaggccttggagaagttcctcacctacctgggggacggcgtcattgtcggccaccacatc
agtcacgacgtcgaaaccttcaacgccggctacgagcgccacttcggctttcgattgcag
aactccagcctggatacgatggacctcaccctgcacctcgaacgcgacggagccttcgcc
ggtcgcgaccccatccaacagttctccctcgatgccctgtgtacgctcttcggcatcatc
ccccacgaccggcacaccgccgccggcgacgccttcatgacggccctggtcttccagcgc
ctgctccgcctcgccgcaaagcacggccggaccagcctggcacgcctgacagaacccttc
gtaccctaa
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