Paludibaculum fermentans: IRI77_04030
Help
Entry
IRI77_04030 CDS
T06895
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfer03016
]
IRI77_04030 (truA)
Enzymes [BR:
pfer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IRI77_04030 (truA)
Transfer RNA biogenesis [BR:
pfer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IRI77_04030 (truA)
Prokaryotic type
IRI77_04030 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QOY89135
UniProt:
A0A7S7NST6
LinkDB
All DBs
Position
1017737..1018480
Genome browser
AA seq
247 aa
AA seq
DB search
MRRIRITVAYDGTEFHGWQVQPGLPTIQGWLEQILTGIESAPVQVHGSGRTDAGVHAIAQ
VAAFDLKNPIPCDNLRKAVNRLLPRSIRVTSVEEAAADFHPRFQAKEKTYEYRIWREEIC
PPMRRLYVFHHPYLLNEEAIRAAAPLLEGEHDFTAFAAADEKDELGRSKVRRIFASAVWR
EGGELVYRVRGSGFLKHMVRMIMGTLLEVGKGNLTEADLLARLQPGYPAKSGPAVPASGL
CLMNVEY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcatccgcatcaccgtcgcctacgatggcacggagtttcacggctggcaggtc
cagcccggcctacccaccatacagggctggttggaacagattctcaccggtattgagagc
gcgcccgtgcaggttcacggcagcggccggactgacgccggtgtccatgcgatcgcgcag
gtggccgcgttcgacctgaaaaatccgattccgtgcgacaacttgcgcaaagcggtcaac
cggttgctgccgcgctccattcgcgtgacttccgtggaagaggcggcggccgattttcat
ccgcgcttccaggccaaagagaagacctatgagtacaggatctggcgggaggagatctgt
ccgcccatgcgccgtctgtatgtcttccaccatccctatctcctgaatgaagaggcgatc
cgggccgcggcgccgctgctggagggggagcacgacttcacggcctttgccgccgccgat
gagaaagatgagctcgggcgctcgaaggtgcggcggatctttgcctccgcggtgtggcgc
gagggcggggaactggtgtatcgtgtgcgcggtagcggctttttgaagcacatggtccgc
atgatcatgggcacgctgctggaggtgggcaagggcaacctgaccgaggccgatctgctg
gcccgcctgcaacccggctatccggccaaatcgggacccgccgtcccggcatccggcctc
tgtctgatgaatgtggagtattga
DBGET
integrated database retrieval system
