Paludibaculum fermentans: IRI77_04075
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Entry
IRI77_04075 CDS
T06895
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfer03016
]
IRI77_04075 (miaB)
Enzymes [BR:
pfer01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
IRI77_04075 (miaB)
Transfer RNA biogenesis [BR:
pfer03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
IRI77_04075 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
PH_21
Motif
Other DBs
NCBI-ProteinID:
QOY89144
UniProt:
A0A7S7NTT9
LinkDB
All DBs
Position
1025951..1027330
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AA seq
459 aa
AA seq
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MGESDRKRYNCWIGAMKSFYLETFGCQMNVHDSEKVIGTLEQRGYAQVDTADAADLVLYN
TCSIRDKAEQKVFHRLQEGKRVKGKVFGVLGCVAQQEGEKIFERAPHVSLVVGSASYTKL
GELLVRIEAGERKVTGLSLDTEDTFETPLTRRDNPHRAYITIIEGCDKSCAYCVVPFTRG
PERSRTSQSVIDETAKLASSGYSEIQLLGQNVNSYRDPSPAGWDFARLLEAVGSVPGIRR
VRFTTSHPRDFVKEIIDAIDRTETLCNQVHLPVQSGSSRVLAAMQRQYTRDQYMQRIEWM
KNAKRDIAISTDIIVGFPGETDEDFEHTLHLLDEVEYDSIFSFKYSQRPNTPALKLEDQI
PEEEKSRRLTILQERQRAIQMRRNTNLVGGRQEVLVEGSNSSTGQWIGRTSQNRILNFTT
APRPDGTVIPRERMIGNYLPVRVTRAGPNSLVGECAIAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatctgacagaaaacgctacaattgttggataggggctatgaaaagcttttac
ctcgaaaccttcggctgccagatgaatgtccatgactccgagaaagtcatcggcacactg
gagcagcgtggctacgctcaggtcgacaccgccgatgcggctgacctcgtgctgtataac
acctgcagtatccgtgacaaagccgagcagaaggtcttccaccgcctgcaggaaggcaag
cgggtcaagggcaaggtttttggtgtcctcggctgtgtcgcccagcaggagggcgagaag
atcttcgagcgcgctccgcatgtcagcctggtggtcggttcagccagctatacaaagctg
ggtgaactcctggtgcggatcgaagcgggcgagcgcaaggtgaccggcctgagcctggac
actgaagacacgttcgaaacacccctcacccgccgcgacaacccgcaccgcgcctacatc
acgatcatcgaaggctgcgacaagagctgcgcctactgcgtcgtccccttcactcgcgga
cctgagcgcagccgcacttcgcagagcgtgatcgacgagaccgcgaagctcgcctcgagc
ggctattccgagatccagctattgggccagaacgtcaacagctaccgggacccttcgccg
gcgggctgggacttcgcgcgcctgctggaggccgtgggcagcgtgccgggcatccgccgc
gtgcgcttcacgacgtcccatccgcgcgatttcgtgaaagagatcatcgacgccatcgac
cgtacggagacgctctgcaaccaggtgcacctgcccgtccagagcggctcgtcgcgcgtg
ctggcggccatgcagcggcaatacacacgcgatcagtacatgcagcgcatcgagtggatg
aagaacgcgaagcgcgacatcgccatctcgacggacatcatcgtaggcttccctggtgag
accgacgaggatttcgagcataccctccacctgctggacgaggtggagtacgacagcatt
ttcagcttcaagtattcgcagcggcccaatacgccggcgctgaagctcgaggaccagatc
cccgaggaagagaagagccggcggctcaccatcctgcaggaacgccagcgcgccatccag
atgcggcgcaacaccaacctggtgggcgggcggcaggaggtgctggtggagggttccaac
agctccaccgggcagtggatcggccgcacgtcgcagaaccggatcctgaatttcaccacc
gcgccgcgtccggatggcacggtgattccgcgtgagcggatgatcggcaactacctgccg
gtgcgggtcacgcgcgcgggtccgaactctctggtgggcgaatgtgctatagcggtgtaa
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