Paludibaculum fermentans: IRI77_05280
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Entry
IRI77_05280 CDS
T06895
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00280
Valine, leucine and isoleucine degradation
pfer00630
Glyoxylate and dicarboxylate metabolism
pfer00640
Propanoate metabolism
pfer00720
Other carbon fixation pathways
pfer01100
Metabolic pathways
pfer01120
Microbial metabolism in diverse environments
pfer01200
Carbon metabolism
pfer04980
Cobalamin transport and metabolism
Module
pfer_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IRI77_05280 (scpA)
00640 Propanoate metabolism
IRI77_05280 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
IRI77_05280 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IRI77_05280 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
IRI77_05280 (scpA)
Enzymes [BR:
pfer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
IRI77_05280 (scpA)
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Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QOY89371
UniProt:
A0A7S7NT65
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All DBs
Position
1306798..1308939
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AA seq
713 aa
AA seq
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MRPDFTKIDYAAPAPEAAPASAAAQNWITNEQIAVKPYYTEADLAGLEHLEYAAGLPPYL
RGPYSTMYVMRPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHER
VTGDVGKAGVAIDSVEDMKILFNQIPLDQMSVSMTMNGAVLPIMAFYIVAAEEQGVPTQK
LSGTIQNDILKEFMVRNTYIYPPAPSMHIIGDIFRYCSERMPKFNCISISGYHMQEAGAT
ADIELAYTLADGLEYLRTGIKSGLNVDEFAPRLSFFWAIGMNHFMEIAKMRAARVLWAKI
VKSFNPKNPKSMALRTHSQTSGWSLTAQDVFNNVVRTAVEATAAALGHTQSLHTNALDEA
IALPTDFSARIARNTQIYLQEETGICRVVDPWAGSYYVESLTNELMQKAWHLIQEVETLG
GMTKAIETGLPKMRIEEAAARRQARIDSGKETIVGINKYRLEQEEQLDVLMVDNQAVRES
QVRRLNEVKASRDSAAVQASLDALTKCAETGEGNVLELAVTAARLRATLGEISMALEKVH
GRYQAVNRTISGVYSSESQSDPEFQKASKAAEDFSKLEGRRPRLLVAKMGQDGHDRGAKV
VATAFADLGFDVDVGPLFATPKEVARMAVENDVHAVGVSSLAGGHKSLVPELVAELKRLG
REDIVVFVGGVIPPQDYDELKAAGAIDVFGPGSVIPVCAQKVLAALMEMPSAA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccggatttcacaaagattgactatgcggctccggcccctgaggccgctcctgcg
tccgctgcggcccagaactggatcacgaacgaacagatcgcggtgaagccttactacacc
gaggcggatctggccgggctcgagcatctcgagtacgcggccggcctgcctccgtatctg
cgcggaccttactccacgatgtacgtcatgcggccctggaccatccggcagtatgccggg
ttctccaccgccgaagagtccaacgccttctaccgccgcaatctcgcagccggccagaag
ggtctctcggtcgccttcgacctggcgacgcaccgcggctacgacagcgatcatgaacgg
gtgacgggcgatgtcggcaaagccggcgtggccatcgattccgtcgaggacatgaagatc
ctcttcaatcagatcccgctggaccagatgtcggtgtcgatgaccatgaatggggccgtg
ctgcccatcatggcattctacattgtggccgccgaagagcagggcgtgccgacgcagaag
ctgagcggaaccattcagaacgacattctgaaagagttcatggtccgcaatacgtatatc
tacccgccggccccgtcgatgcacatcattggcgacatcttccggtattgctccgagcgg
atgcccaagttcaactgcatctcgatctcgggctaccacatgcaggaagcgggcgcgacg
gccgatatcgagctggcttacacgctggccgatgggctggagtacctgcgtaccggcatc
aagtccggtttgaatgtggacgagttcgcgccgcgcctgagcttcttctgggccatcggc
atgaaccacttcatggagatcgccaagatgcgcgcggctcgcgtgctgtgggcgaagatc
gtgaagtcgtttaacccgaagaacccgaagtcgatggctttgcggacgcattcccagacc
tcgggctggtcgctgacggcgcaggacgtgttcaacaacgtggtgcgtacggctgtcgaa
gccactgccgccgcgctggggcacacccagtctctgcacaccaacgcactggacgaagcc
atcgcgctgcccaccgatttctcggcgcgcatcgccagaaacacccagatctacctgcag
gaagagaccggcatctgccgcgtggtggatccctgggccggcagctactacgtcgaatcg
ctgaccaatgagctgatgcagaaggcgtggcatctaatccaggaagtggaaaccctgggc
ggcatgaccaaagccatcgaaaccggcctgccgaagatgcgcatcgaagaggcggcggcc
cgccgtcaggcgcgcatcgactccggcaaggagacgatcgtcggcatcaacaaataccgg
ttggagcaggaagaacagctcgacgtgctgatggttgacaaccaggccgtccgcgagagc
caggtccgccggctgaacgaagtgaaggcctcgcgcgattccgccgcggtccaggcctct
ctcgacgcgctgaccaagtgcgctgagacgggcgaaggcaacgtgctggaactcgccgtc
accgccgcccgcctacgggcgacgctgggcgagatctcgatggcgctcgagaaggtgcat
gggcggtatcaggccgtgaaccgcacgatctccggtgtctactccagtgagagtcagagc
gatcctgagttccagaaggccagcaaggccgctgaggacttctccaagctcgaaggccgg
cgtccgcgcctgctggttgccaagatgggccaggacgggcacgaccgcggagccaaagtg
gtggccaccgccttcgccgatctcggctttgacgtcgacgtcggtccgctgttcgccacc
cccaaggaagtggcgcgcatggccgtcgaaaacgatgtgcatgcggtgggcgtcagttcg
ctcgccggcggtcacaaatcgctggtgcctgagctggtggctgaactgaagcggctgggc
cgtgaggacatcgtggtatttgtgggtggcgtgattcctccccaggactacgacgagctc
aaggcggccggcgcgatcgatgtgtttggaccgggttcggtgattcctgtctgcgcgcag
aaggtgctggcggcattgatggagatgccgagtgccgcctga
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