Paludibaculum fermentans: IRI77_05305
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Entry
IRI77_05305 CDS
T06895
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00240
Pyrimidine metabolism
pfer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
IRI77_05305
Enzymes [BR:
pfer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
IRI77_05305
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
QOY89375
UniProt:
A0A7S7NT73
LinkDB
All DBs
Position
complement(1314802..1315716)
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AA seq
304 aa
AA seq
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MKSDQLWIAPRVRGAKLPVVALESTIIAHGMPYPVNVETALEVESIVAAQGATPATLGIL
DGRIIVGLSEAEIRRMGSEPGVLKACERDIPLAVAQGRNAAVTAGASIAIAAAAGIRVFV
TGGIGAVGPHASRDFDISADLPAIAGYPVITVCAGAKAFMDIGATLEWLETQRVPVATWG
SDQFPLFYSRRSGFSSGWRVDDAEEVASVFAAKRRLGLDGGLLVAVPLPEEQALPEEVTR
AAIHGALEQAEAAGIRGKALTPFLLSKIKELTGGRSLESNIALIKNNARVGARIAAALGS
MDLP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgatcaactgtggattgcgccgcgcgtgcggggggcgaagctgcccgtggtg
gcgctggagtccacgatcatcgcgcatggcatgccgtatcccgtgaatgtggagacggcg
ctggaggtggagtcgattgtcgcggcgcaaggcgcgactccggcgacgctggggatcctg
gatggccgcatcatcgtgggcttgagcgaggcggagatccggcggatgggttcggagccg
ggcgtgttgaaagcgtgcgagcgggatatcccgctggcggtggcgcagggtcgaaatgcg
gcggtcacggccggtgcgagtatcgccatcgcggcggcggcggggatccgggttttcgtg
acgggcggaatcggggcagtgggtccgcatgcttccagggacttcgatatctcagcggat
ctgcctgcgatcgccggctacccggtgatcacggtgtgcgccggcgccaaggcgttcatg
gatatcggcgcgaccttggaatggctggagacgcagcgcgtaccggtggcgacctggggc
agtgaccagtttccgctgttctactcgagacgcagtgggttcagcagcggctggcgagtg
gatgacgcggaagaggtggcaagcgtctttgcagccaagcgcaggttggggctggacggc
ggactgctggtggctgtgccgttgccggaggagcaggccctgccggaagaagtgacccgg
gctgccattcacggagcgctggagcaggcggaggccgcggggatcaggggcaaggcgctg
accccgttcctgctctccaagatcaaagaactcacaggcgggcggagcctggaaagcaac
atcgcgctgatcaagaacaacgcccgggtgggggcgcggatcgcagcggctcttggctcg
atggacttgccgtag
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